Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1342 ATGCCTTCAAAGAGGCTTCCATGGAGATCCTTAGTACTTGGTTGTTTCAAGGCTAAAAACCAACAAACCTTGGAAGCTCCAAACATAGTTTCAAAGAAGTCGTCATCAAGTAGAATCTTTCTCTCTGATTTAAGCCTGAGCGATTATTCATCGCTCTCTATCATGAGTGATTTATCCAATTCTCTAGTGGGATCAAATCTTCGTATTTTCACCTACCAGGAGCTCAAAGAGATCACACACAGCTTTAGCAAATCCAACATTCTTGGGGAAGGTGGGTTTGGGAAGGTGTATAAAGGGTTTATTGATGACAGTTTTAAGCGTGGGTTGAAAGCTCAGGTTGTGGCAGTTAAGGCCTTAAACTTGGATGGAAAACAAGGCCACAGAGAGTGGTTGGCTGAAGTAATCTTTCTGGGGCAGTTGAAGCATCGCCATCTGGTTAACTTGATTGGCTATTGCTGCGAAGATGAGTACAGGCTTCTTGTGTATGAATACATGGAGAGGGGCAATCTGGAGGAAAAGCTTTTCAAAGGTTATGTAGCAGCCTTGCCTTGGCTAACAAGAATCAAAATAGCAATTGGGGCAGCTAAGGGACTTATGTTTCTCCATGAAGAAGAAAAACCAGTCATATATAGGGATTTTAAGGCCTCAAACATCCTACTGGACGCTGATTACAATGCGAAGCTCTCAGATTTTGGTTTAGCAATAGATGGACCAGAAAAAGATCAAACACACATTACAACTCGTGTTATGGGCACGAAAGGTTATGCTGCCCCTGAGTACATCATGACAGGCCATTTGACAACCATGAGTGATGTATATAGCTTTGGAGTTGTACTCTTAGAACTCCTCACAGGAAAGAAATCCGTGGACAAAAAACGACCCAGCAGAGAGCAGGATTTGGTGGAATGGGCAAGGCCTTTGTTGAGGGACTCCTATAAACTAGAGAGAATAATGGACCCAAGACTTGAGGATCAGTACTCACCTGAAGGGGCTAAAAGGTTTGCAGCCTTGGCTTACCAATGTTTGAGCCACCATGCGAAGGGTAGGCCCACCATGAGAACAGTGGTTCGGACCTTAGAGTCTCTCTTGAAACTGAAAGACATCCCAGTTGGCCCTTTTGTGTATGTGGTACCCAGTGAGGAAGACAAAGACATACCCAAAGTGAATGAAAAAGTAACAGAAAATGACCATGTTGTTCAGATCAACCAAATTGATGAGTTAAAACCCAAAGAAGAAGAAAAGGGAGAGAAAAAAGAAAAGGGTCACCACCGGCAACGAAAAAGTCGTCGCCACAAACGTCGTGTTAAGCCCGTGAGGTCTCAACCTGTTTACTCTGACACTGCTCTGTACAAAACTCTTGGCACAAATCTGTACTCTCCCAAACAAGCAACGTGA 1395 0.4351 MPSKRLPWRSLVLGCFKAKNQQTLEAPNIVSKKSSSSRIFLSDLSLSDYSSLSIMSDLSNSLVGSNLRIFTYQELKEITHSFSKSNILGEGGFGKVYKGFIDDSFKRGLKAQVVAVKALNLDGKQGHREWLAEVIFLGQLKHRHLVNLIGYCCEDEYRLLVYEYMERGNLEEKLFKGYVAALPWLTRIKIAIGAAKGLMFLHEEEKPVIYRDFKASNILLDADYNAKLSDFGLAIDGPEKDQTHITTRVMGTKGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKKSVDKKRPSREQDLVEWARPLLRDSYKLERIMDPRLEDQYSPEGAKRFAALAYQCLSHHAKGRPTMRTVVRTLESLLKLKDIPVGPFVYVVPSEEDKDIPKVNEKVTENDHVVQINQIDELKPKEEEKGEKKEKGHHRQRKSRRHKRRVKPVRSQPVYSDTALYKTLGTNLYSPKQAT* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1342 464 Pfam Protein tyrosine and serine/threonine kinase 85 359 IPR001245 GO:0004672|GO:0006468
Pvu10g1342 464 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
Pvu10g1342 464 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1342 464 SUPERFAMILY Protein kinase-like (PK-like) 57 360 IPR011009 -
Pvu10g1342 464 PANTHER BNAA02G16030D PROTEIN 29 417 - -
Pvu10g1342 464 MobiDBLite consensus disorder prediction 405 446 - -
Pvu10g1342 464 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Pvu10g1342 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pvu10g1342 464 PANTHER OS01G0588500 PROTEIN-RELATED 29 417 - -
Pvu10g1342 464 MobiDBLite consensus disorder prediction 405 419 - -
Pvu10g1342 464 Gene3D Transferase(Phosphotransferase) domain 1 165 368 - -
Pvu10g1342 464 MobiDBLite consensus disorder prediction 420 438 - -
Pvu10g1342 464 CDD STKc_IRAK 88 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1342 Pvu-Chr10 39891173 39893446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1342 68 359 Glycoside Hydrolase AT3G07070 50.847 1.78e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu10g1342 PK_Tyr_Ser-Thr 5.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1342 - - gmx:100790454 746.503