Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1336 ATGTCTGCACCGATGATAATTGACCCTGTGGTGATATCGGCACCAGAAACTCAATCAGCAGCTAGCATGCTAGTTGGACAAAGTGAAGTTGAATTTGCTGTGTGTGACTGTTGTGGACTAACAGAAGAGTGCACCCCAGCCTATATAGAAAGAATCAGAGAGAGGTACCATGGAAAATGGGTTTGTGGGTTGTGTGCCGAGGCTGTTAAGGATGAAATAGTAAGGTCTGAGAGGCTTGTTAGCACAGAAGAAGCAATGGCAAAGCATATGAACTTCTGCAAAAAGTTCAAGGCATCAGGGCCTCCTCCAAATCCAACAGTGCATTTGATATCAGCTATGAGACAAATTCTTAGAAGGAGTTTGGATTCTCCTAGAGTAAGGTCCACACCGAATAGTCCAACTAAGACCATCACAGAAATCCATGGTTCTGTGCTTACAAGGTCAGAGAGCTGCTTCCCTACCCTCACTGAAGGATTGGGATGA 483 0.4493 MSAPMIIDPVVISAPETQSAASMLVGQSEVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAVKDEIVRSERLVSTEEAMAKHMNFCKKFKASGPPPNPTVHLISAMRQILRRSLDSPRVRSTPNSPTKTITEIHGSVLTRSESCFPTLTEGLG* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1336 160 PANTHER OS01G0745000 PROTEIN 17 155 IPR012876 -
Pvu10g1336 160 Pfam Protein of unknown function (DUF1677) 30 119 IPR012876 -
Pvu10g1336 160 PANTHER DUF1677 FAMILY PROTEIN (DUF1677) 17 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1336 Pvu-Chr10 39810943 39812461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1336 - - gmx:100803697 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0856 9 13219454 13220467 Pvu10g1336 10 39810943 39812461 ECH
Pvu10g1336 10 39810943 39812461 Pvu10g1336 10 39810943 39812461 ECH
Pvu10g1336 10 39810943 39812461 Pvu9g0857 9 13222718 13224178 ECH
Pvu10g1336 10 39810943 39812461 Pvu1g0455 1 4721148 4722442 ECH