Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1328 ATGGAGAGCCTCCCGCTTGACACGGCGGAGAAGATTATTCTGCGGTGGGACTCGACGGCGTCGGAGGACGCCCGCGACAAGATGATATTCTCCGGCGACCGCGACGAGGCGGATCTCTACCTGCAGGCGGTGGACGAAATCCAGAGGTCCCTCTCCTCCGTTTCCGTGTCGGAGAAAGTCAACTCGGCCATCCAGATCGCCATGGCCCGCTTAGAAGACGAGTTCCGCAACATCCTCATCTCCCACACCAACCCCTTCGACCCCACCACCGAAGACGAGGCCTCCCAAACCCTTGACCCTCCTTCTTCCTCCTCTTCTCCCAAACACCCTGACAACGACGAAAACGACGAAGTCAGCCAAACCTCTCTCCTCCGTTTCAACAGCGACGGCGCTGCTTCCTCCGTCACGGGGAGCTACCGCTCCACCAGCAGCATCCGCGAGATCGATCTCATCCCCTGCGACGCCGTCTACGACCTCCGTTGCATCGCCGAACGCATGGTCTCCTCCGGCTACTTGCGCGAGTGCATCCAGGTGTACGGCAGCGTCAGAAAATCCTCCGTCGACGCCAGCTTCCGCAAGCTCGGAATCGAGAAGCTCAGCATCGGCGACGTGCAGCGCCTCCAGTGGGAGCAGCTCGAGAACAAAATCAGACGCTGGATAAGAGCCGCGAAAGTCTGCGTCAGAACGCTCTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTCGATGGAGTCGGAACCTCCATCGATGACGCTTGCTTCATGGAGACTGTGAAGGGCCCTGCGATTCAGCTCTTCAACTTCGCCGAGGCGATTAGTATTAGCCGGAGGTCGCCGGAGAAGTTGTTCAAGATTCTGGATTTGCACGATGCGTTGACGGAGTTGATGCCGGATATTGATGTCGTGTTTGATTCCAAGTCCTCGGAGTCGATTAGGGTTCAGGCAGCGGAGATTCTGTCGAGGTTGGGGGAGGCTGCGAGGGGGATTCTGTCGGAGTTTGAGAACGCCGTGCTTAAGGAACCCTCTAGGGTTCCTGTTCCTGGTGGAACGATTCACCCTCTGACTCGGTATGTGATGAACTACATAAGTTTGATCTCTGATTACAAGGTTACTTTGAATGAGCTTATAGTGTCTAAGCCATCCACGGGGTCTAGGTATTCGGGTGATCCTGGGATACCCGATTTGGATTTGACTGAGTTTGAGGAGAAGACCCCTTTGGATGTGCACTTGATTTGGATTATTGTGATATTACAATTCAACTTGGATGGGAAGAGTAAGCATTACAAGGATGCGTCTCTGGCTCACTTGTTTGTGATGAACAATGTGCACTACATTGTGCAGAAGGTGAGGGGGAGTCCGGAGTTGAGGGAGATGATTGGGGATGATTATTTGAAGAAGCTCACCGGAAAGTTCCGGCAGGCAGCCACGAGCTACCAGAGGGCAACGTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGGTTGCATGTGAGTGGGGGGTTTTCTTCTGGGGTGTCCAGGAATGCTCTGAGGGAGAGGTTTAAGGCTTTTAATGCCATGTTTGAGGAGGTTCACAGGACTCAGGCGGTTTGGTTGATACCGGATTCGCAGCTCAGGGAGGAGCTGAGGATATCGATATCGGAGAAGCTGATTCCGGCGTATAGGTCGTTTCTTGGGAGGTTCAGGGGCCACATAGAGAGTGGGAGGCATCCGGAGAATTACATCAAGTACACTGTTGAGGACCTGGAGGATGCTGTTTTGGACTTTTTTGAAGGGATTGCTGTTTCCCAGCACTTGAGGAGGAGATCTGAATGA 1815 0.5394 MESLPLDTAEKIILRWDSTASEDARDKMIFSGDRDEADLYLQAVDEIQRSLSSVSVSEKVNSAIQIAMARLEDEFRNILISHTNPFDPTTEDEASQTLDPPSSSSSPKHPDNDENDEVSQTSLLRFNSDGAASSVTGSYRSTSSIREIDLIPCDAVYDLRCIAERMVSSGYLRECIQVYGSVRKSSVDASFRKLGIEKLSIGDVQRLQWEQLENKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALTELMPDIDVVFDSKSSESIRVQAAEILSRLGEAARGILSEFENAVLKEPSRVPVPGGTIHPLTRYVMNYISLISDYKVTLNELIVSKPSTGSRYSGDPGIPDLDLTEFEEKTPLDVHLIWIIVILQFNLDGKSKHYKDASLAHLFVMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSRNALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRGHIESGRHPENYIKYTVEDLEDAVLDFFEGIAVSQHLRRRSE* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1328 604 Gene3D Exocyst complex component Exo70 12 600 - -
Pvu10g1328 604 MobiDBLite consensus disorder prediction 82 108 - -
Pvu10g1328 604 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 603 IPR004140 GO:0000145|GO:0006887
Pvu10g1328 604 Pfam Exo70 exocyst complex subunit 218 586 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pvu10g1328 604 MobiDBLite consensus disorder prediction 82 118 - -
Pvu10g1328 604 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 603 - -
Pvu10g1328 604 SUPERFAMILY Cullin repeat-like 34 591 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1328 Pvu-Chr10 39730506 39733042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1328 6 604 EXO70 exocyst subunit family AT1G72470 70.894 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1328 K07195 - gmx:100808671 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1328 10 39730506 39733042 Pvu10g1328 10 39730506 39733042 ECH