Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1327 ATGCAGGGGTCACAAGAAAAAACAAGGGAAACTAGCAGAAGCAATGACCCGGAAAAAAAAATCACAATCACATTCCTTAGTTCTGAATACGCCCTGAGGCACCAAATTTTCAGCAGAGTAATGGCCATAGCTCCGGCGATAATTCTCCACCCAACTCTCATCATCATTGTCACTTTGCCTGTGATATATTCCATGACAGAAGCCGAAGCTTTGGTGAGTCTCAAAAGAACTTTCTCCAACGCTGAACTTTTGGATGGTTGGGTGGCTGATTCTGCACCTTGTAGTGTAGAAGATCAATGGGAAGGTATTCTTTGCAACAATGGCCTTGTCACGGGGCTTCGCCTTGGAGGAATAGGGTTAATCGGGGAAATAACCGTTGATCCATTGCTTGAACTCAAGGGTCTTCGAACTATCAGCCTTAACAACAATTCTTTCTCAGGGTCCATGCCAGAGTTCAACCGAATAGGGTTCTTGAAAGCCTTGTATTTGCAAGGAAACAAGTTTTCTGGGGATATTCCTCCGGAATACTTCCAGAGAATGAAGTCTTTGAAGAAAGTGTGGCTTTCTGATAACCAATTCACGGGGAGCATTCCAAATTCATTGACCGAAGTTCCTAGTCTTGTGGAGTTGCACCTTGAAAATAACCAGTTTAGTGGAACCATTCCTGATTTTAATAACCCATCATTGGAGAAATTAGATGTTTCCAACAACAAATTGAAAGGTGAAATTCCAGCTAGTTTGTTGAGATTCAGTGAGAACTCGTTTTCAGGGAACTCTGGTCTTTGTGGTGAGAGGGTTGGAAAACCATGTGAGAAGCCAATGGAGACCCCAAGTCCTGCTCCTATGGTTGCATCAGATGCAGAAGATAATGCACAAGATAATGGTGGTGGTGATGCGCATGTTCCACATAAGAGTACCTCATGGGAGGTTACTGGCATTATAATAGGGAGTGTAGTGCTTGTCTCAATAATTGTATTTTGTATTGTGAGAACAAGGCGAAAGAAGGAGGAGGAGGAGAACTTTGATATTTTTGGAAATTATACTAATGGTGGTTCCGTGGAAGTTCAAGTGACTGCACCGGTGAAAAGGGATATGGAAGCAAGTACAAGTGCACCAGTTAAGAAATCATCATCCAGAAGGGGATCTACAAGTTCTCAGAGCAAAAGCGTTGGAGAACTTGTGATGGTAAATGATGAGAAGGGTGTGTTTGGGTTGCCAGATTTGATGAGGGCAGCCGCGGAAGTGCTGGGAAATGGAAGCTTTGGATCTTCTTACAAAGCCGTCATGGCTAATGGAGTGGCAGTGGTGGTGAAAAGGACCAGAGAGATCAATGCTTTGGAAAAAGATGGTTTTGATGCAGAGATGAGGAAGCTCACAGCGCTTAAACACTGGAATATATTGACCCCTTTAGCTTATCATTTCAGAAAGGAGGAGAAACTAGTGATCTCTGAGTATGTTCCCAGAGGCAGTCTACTGTTTTCACTGCATGGTGACAGAGGAACATCGCATGCTGATCTAGATTGGCCTGCACGTATTAAGATTGTTCATGGAATTGCGGAAGGGATGAGTTATCTTCACAGAGAACTTGGTTCCTCGGATCTCCCACATGGCAATCTGAAGTCCAGCAACGTTCTTCTGGGACCAAACAACGAAGCATTGCTGGTAGATTATGGGTTCAGCAACATGGTTAACCCTTCAAATGCTGCACAGACACTATTTGCTTTCAGGGCACCAGAGGCAGTACAACATAACCAAATTTCACATAGCTGTGATGTTTACTGTCTTGGGGTTGTGATTCTGGAGATACTCACTGGGAAATTCCCTTCTCAATATCTTATCACTGGGAAGGGTGGAACCGATGTGGTGCAATGGGTTGAAACAGCAATCTCTGAGGGGAGGGAGTCAGAAGTGGTTGATCCAGAAATTGCAAGCTCTAGGAAATGGGTAGGTGAGATGAAGAAACTCCTGCATGTTGGTTCTGCTTGCACCGAAAGTAACCCTGTGCAACGGTTAGGGTTGGAGGAAGCCTTTAGAAGGATAGAGGAGATAAGATCGGAGGGTGGCCATGGCCAAGAATCAAGAACAATAGAGGTGTTGCCATGTCATAGACGTGGGTCTGCAGGTTCACAACAATTTGAGAACCAAGGGCCTTTTGACCCCTCACGGAGGAGACATGGAACAAACAGCTTCGGAAGTGAGGATAATATTGAACTTGGCAACTCCTAG 2226 0.4456 MQGSQEKTRETSRSNDPEKKITITFLSSEYALRHQIFSRVMAIAPAIILHPTLIIIVTLPVIYSMTEAEALVSLKRTFSNAELLDGWVADSAPCSVEDQWEGILCNNGLVTGLRLGGIGLIGEITVDPLLELKGLRTISLNNNSFSGSMPEFNRIGFLKALYLQGNKFSGDIPPEYFQRMKSLKKVWLSDNQFTGSIPNSLTEVPSLVELHLENNQFSGTIPDFNNPSLEKLDVSNNKLKGEIPASLLRFSENSFSGNSGLCGERVGKPCEKPMETPSPAPMVASDAEDNAQDNGGGDAHVPHKSTSWEVTGIIIGSVVLVSIIVFCIVRTRRKKEEEENFDIFGNYTNGGSVEVQVTAPVKRDMEASTSAPVKKSSSRRGSTSSQSKSVGELVMVNDEKGVFGLPDLMRAAAEVLGNGSFGSSYKAVMANGVAVVVKRTREINALEKDGFDAEMRKLTALKHWNILTPLAYHFRKEEKLVISEYVPRGSLLFSLHGDRGTSHADLDWPARIKIVHGIAEGMSYLHRELGSSDLPHGNLKSSNVLLGPNNEALLVDYGFSNMVNPSNAAQTLFAFRAPEAVQHNQISHSCDVYCLGVVILEILTGKFPSQYLITGKGGTDVVQWVETAISEGRESEVVDPEIASSRKWVGEMKKLLHVGSACTESNPVQRLGLEEAFRRIEEIRSEGGHGQESRTIEVLPCHRRGSAGSQQFENQGPFDPSRRRHGTNSFGSEDNIELGNS* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1327 741 Pfam Protein kinase domain 414 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1327 741 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 47 688 - -
Pvu10g1327 741 MobiDBLite consensus disorder prediction 370 389 - -
Pvu10g1327 741 Pfam Leucine Rich Repeat 228 248 IPR001611 GO:0005515
Pvu10g1327 741 Gene3D Ribonuclease Inhibitor 225 273 IPR032675 -
Pvu10g1327 741 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Pvu10g1327 741 SUPERFAMILY Protein kinase-like (PK-like) 414 682 IPR011009 -
Pvu10g1327 741 MobiDBLite consensus disorder prediction 269 303 - -
Pvu10g1327 741 ProSiteProfiles Protein kinase domain profile. 410 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1327 741 MobiDBLite consensus disorder prediction 706 741 - -
Pvu10g1327 741 SUPERFAMILY L domain-like 86 251 - -
Pvu10g1327 741 Pfam Leucine rich repeat N-terminal domain 67 106 IPR013210 -
Pvu10g1327 741 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 47 688 - -
Pvu10g1327 741 Gene3D Transferase(Phosphotransferase) domain 1 486 698 - -
Pvu10g1327 741 Gene3D Ribonuclease Inhibitor 65 224 IPR032675 -
Pvu10g1327 741 MobiDBLite consensus disorder prediction 362 389 - -
Pvu10g1327 741 Gene3D Phosphorylase Kinase; domain 1 377 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1327 Pvu-Chr10 39722132 39724939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1327 43 683 Receptor kinase-like Gene Family AT3G42880 44.055 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu10g1327 Pkinase 1.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1327 - - var:108346415 1133.24