Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1319 ATGGCTAATGAAGGAAACAAAAGCAGTGACTTCTATACGATCTTGGGGTTGAAAAAGGAGTGCACTGAATTGGAGCTAAAGAATGCATATAAGAAACTTGCAAAGAAATGGCACCCGGATCGTTGTTCAGCATCTGGGAATTCAGAGTTAGTGGAACAAGCTAAAAAGAAATTCCAGGAAATTGGGGAGGCCTATTCTGTTTTATCTGACGCCAACAAAAGATTAATGTACGACGTTGGAGTCTACGATAGTGATGACGACGAAAACGGCATGGGGGACTTTTTGGACGAAATGTTAACAATGATGAGTCAGACCAAATCAAATGAAAATGGAGAGGAGAGCTTTGAGGAGTTGCAACAGTTGTTTGAAGACATGTTTCAAGCTGATATTGGATTGGATGGAAGCTCTTCTCTTTCTTCTGCCAATTGCTCTACTTCATCTGCTTACATGACTTACAGTGAAAGTTCTAGTTCAAATAAACGCAATTCCACTGAGATGAAATTTGGGAAGGCAGAGGATTCCTCAGTCTTTGATACCAGTTACCAGAATTTCTGTTTTGGGACAGGTGAACCTACTCCAAGATATAGAGGAGGAAAGGGAGGGAATTCCAGAAGGAGGAGGTAG 624 0.4135 MANEGNKSSDFYTILGLKKECTELELKNAYKKLAKKWHPDRCSASGNSELVEQAKKKFQEIGEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNENGEESFEELQQLFEDMFQADIGLDGSSSLSSANCSTSSAYMTYSESSSSNKRNSTEMKFGKAEDSSVFDTSYQNFCFGTGEPTPRYRGGKGGNSRRRR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1319 207 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pvu10g1319 207 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pvu10g1319 207 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pvu10g1319 207 PRINTS DnaJ domain signature 73 92 IPR001623 -
Pvu10g1319 207 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Pvu10g1319 207 Gene3D DnaJ domain 7 136 IPR036869 -
Pvu10g1319 207 CDD DnaJ 10 70 IPR001623 -
Pvu10g1319 207 PANTHER PUTATIVE, EXPRESSED-RELATED 1 206 - -
Pvu10g1319 207 Pfam DnaJ domain 10 78 IPR001623 -
Pvu10g1319 207 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pvu10g1319 207 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Pvu10g1319 207 MobiDBLite consensus disorder prediction 186 207 - -
Pvu10g1319 207 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 206 - -
Pvu10g1319 207 SMART dnaj_3 9 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1319 Pvu-Chr10 39640757 39644354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1319 11 78 C2H2 Transcription Factor Family AT1G74250 42.029 8.97e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1319 - - gmx:100791192 308.916