Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1305 ATGGCCAAAGTGGGAAAACTAACAAAGCTGAAGTCAGCAATCAAGAGATGGCCCTCATTGACGAAGCTCAGCCGCAGCAACAGCTCTGTCTCTTCCAACAAAGGACTCACCGGAACATCCTCTTCATCCAAGGAACATGCACATGAACAAGAGCTTCATGCTGTTTATGTTGGCAAATCTAGGAGGCGCTACCTCGTAAACTCCGAAGTGATCGACCACCCTGTGTTTCAGGAGCTTCTGGATAGGTCTTCTTCATCTCATGATGATGGGGTGGTGGTGTCCTGTGAGGTGGTGCTGTTTGAGCACTTGCTGTGGATGCTTGAGAGCGAAGAGACCCAGTTGGGGTCCATGGATGAGCTGGTTGAGTTCTACACTTGTGCATGCTGA 387 0.4987 MAKVGKLTKLKSAIKRWPSLTKLSRSNSSVSSNKGLTGTSSSSKEHAHEQELHAVYVGKSRRRYLVNSEVIDHPVFQELLDRSSSSHDDGVVVSCEVVLFEHLLWMLESEETQLGSMDELVEFYTCAC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1305 128 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 4 126 - -
Pvu10g1305 128 MobiDBLite consensus disorder prediction 22 43 - -
Pvu10g1305 128 MobiDBLite consensus disorder prediction 22 49 - -
Pvu10g1305 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 126 IPR003676 GO:0009733
Pvu10g1305 128 Pfam Auxin responsive protein 15 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1305 Pvu-Chr10 39542814 39543849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1305 3 107 Calmodulin-binding Proteins AT4G34750 23.853 3.22e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1305 - - gmx:100797158 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1305 10 39542814 39543849 Pvu10g1305 10 39542814 39543849 ECH