Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1288 ATGGAGAATCGGAAGACATCGGCGTACTACGAGAACAGAGCGGTGCAGTTCGGCGTAGTCAGCACCGAGTGGCTCGCTCAGGCTCAGTCCGCCACCGTCCATCGCCCTCCTTCTCCTCCTCCGCATAATGACGCCGCCGACAAACCCTTCTCCGTCATCCACGAGTTCGACACCTGGCGCAAGCACCCCGATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTCATCCGCTCTAGCACGGCCACCACCATGATGCAGCTCGAAATCCAACTCAAAAACGCCTCCGATTCCCTCAAATGTTGGGATACAACCTCCATCTCCTTAACCGCCGCCTGCGATCTCTTCATGCGATACGTGACCAGGACCTCCGCTCTCGAATACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCCGATAAGTTCGGCGAAATCTCCTTCAAGGCTCGCGAAATCATTGCAATGCTCAGCCAGGATTTTATTTTCGACGGTTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTGCTTCAGATTCTCAAACTCGCCGCACAGAACAACAAGCTCTTTAGAGTCTTCTGCACAGAGGGGAGACCGGATAGAACGGGTTTGAGGTTGTCCAATGAGCTGGCGAAGCTTGATGTGCCTGTGAAGCTTGTTATAGACTCTGCAGTGGCGTATACTATGGATGAGGTTGACATGGTGTTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGGACTTACCAAATTGCAATGGTCGCCAAGAGTATGAACAAACCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGATTTTACCCTCTGGACCAAAAGGATTTGGCCCCTGCCTTACGCCCTGTTGATTTTGGTGTGCCTGTTCCATCCAAGGTTGAGGTTGAATGTTCTGCGCGGGATTATACTCCTCCTCAGTATCTCACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATATTTGTAG 1050 0.5152 MENRKTSAYYENRAVQFGVVSTEWLAQAQSATVHRPPSPPPHNDAADKPFSVIHEFDTWRKHPDLAEAVAAIRALAAVIRSSTATTMMQLEIQLKNASDSLKCWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERADKFGEISFKAREIIAMLSQDFIFDGCTILVHGFSRVVLQILKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKFARFYPLDQKDLAPALRPVDFGVPVPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1288 349 Gene3D - 153 349 IPR042529 -
Pvu10g1288 349 Gene3D - 49 150 IPR042528 -
Pvu10g1288 349 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 7 349 - -
Pvu10g1288 349 SUPERFAMILY NagB/RpiA/CoA transferase-like 64 348 IPR037171 -
Pvu10g1288 349 Pfam Initiation factor 2 subunit family 63 337 IPR000649 GO:0044237
Pvu10g1288 349 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 7 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1288 Pvu-Chr10 39371132 39373478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1288 7 349 Eukaryotic Initiation Factors Gene Family AT1G53880 80.758 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1288 K03239 - gmx:102669842 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1288 10 39371132 39373478 Pvu10g1288 10 39371132 39373478 ECH
Pvu9g2705 9 37357559 37360363 Pvu10g1288 10 39371132 39373478 PCT