Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1265 ATGGCTTCCTCCTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCACCCCAAGTTCAAAAAATGGATCACTCTTGGGAACCGCAAAAGCTTCTTTTCTGAGTGGGAGGAAACTGAAGGTGAACAGTTTGACAGCACCAGTTGGAGCACGATCCAGCACTACAGTGTGTGCAGTTGCTGATCCTGATAGGCCTCTGTGGTTCCCAGGAAGCACTCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGGGATTTTGGCTTTGATCCTCTCGGTCTTTCATCTGATCCTGAGAGCTTGAGATGGAATGTTCAGGCAGAGCTGGTGCACTGCAGATGGGCCATGTTGGGTGCTGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTGTCCTTAACACCCCTTCATGGTACACTGCTGGAGAGTTGGAGTATTTCACAGACACTACCACACTCTTCGTAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGCAGAAGATGGGCTGACATCATCAAGCCAGGCTCTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACCGATGTTGGGTACCCAGGTGGGCTTTGGTTTGATCCACTTGGCTGGGGAAGTGGTTCTCCAGAGAAGCTCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCAGGCCATGCTACTATTTTTGCT 792 0.5063 MASSCASSAIAAVAISTPSSKNGSLLGTAKASFLSGRKLKVNSLTAPVGARSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFVVELFFIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1265 264 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Pvu10g1265 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Pvu10g1265 264 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Pvu10g1265 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 264 - -
Pvu10g1265 264 SUPERFAMILY Chlorophyll a-b binding protein 59 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1265 Pvu-Chr10 39161195 39162986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1265 45 264 Chloroplast and Mitochondria Gene Families AT3G61470 90.045 8.51e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1265 K08908 - gmx:100784089 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2687 9 37274635 37276311 Pvu10g1265 10 39161195 39162986 PCT