Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1256 ATGGAGATTGTAGGATTCGGTTTTCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAAACATAGGTTGCTCGGTGATGATCCACATGTCCACGTCATCCCTGACATTGACCTTTGTGAGGTGGAACCTTGGAACGTACCAATGTTATTAGCACAATCAGCTGTACAATTCGATCTTCCAGAATGGTTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAATAGTAAAAGGGTTAACAGAACAACCAAGTGTGGCTTCTGGAAACCTACTGGAAAAGATCGTGAGATCAGGAGTTTGGACACAGACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTATAAAGGCCGTGTTTCCCGCGGTGTCAAGTCCAACTGGATTATTCATGAATACCATGCTGTTACCTTTCACGAAAGCCAGAGGACTTCTGTTTTATGTCGCCTGATGAAGAAACCTGGACCAACAACTGAAGGTGAAGGTGATACACAGACTAGCGATGAAGGGGAGAGCAGTAGAGTCATGGTTTCTGGCTATGAAAATGAGGCAATAGAAAGGGGGATTCCTTCAAGAGGTACTTCTGCTGGAATAGAGACGACCTTTCAGCCTATGCATCAAACATATAATTACTTCCCCCCACTGCAACAGTCTCCAATTGGCATTGACCAAGAGGAATCTTCTCTTCCACACTCCCCATTTTACAGTTCCCATTTTAGAAATGAATCCAACAATATGCAGATTCCATTTGAAACTACCCAGGAGGAGGAGCAATTCCTGAGTTCTATTTGGGTTGATGAGAGAGAACTTGGATACCAGATGCCATCAATCTTCTGA 834 0.4317 MEIVGFGFRPTEEELVDYYLKHRLLGDDPHVHVIPDIDLCEVEPWNVPMLLAQSAVQFDLPEWFFFSPVDFKYSNSKRVNRTTKCGFWKPTGKDREIRSLDTDTLIATKKTLVYYKGRVSRGVKSNWIIHEYHAVTFHESQRTSVLCRLMKKPGPTTEGEGDTQTSDEGESSRVMVSGYENEAIERGIPSRGTSAGIETTFQPMHQTYNYFPPLQQSPIGIDQEESSLPHSPFYSSHFRNESNNMQIPFETTQEEEQFLSSIWVDERELGYQMPSIF* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1256 277 SUPERFAMILY NAC domain 4 152 IPR036093 GO:0003677|GO:0006355
Pvu10g1256 277 ProSiteProfiles NAC domain profile. 2 152 IPR003441 GO:0003677|GO:0006355
Pvu10g1256 277 Pfam No apical meristem (NAM) protein 4 133 IPR003441 GO:0003677|GO:0006355
Pvu10g1256 277 MobiDBLite consensus disorder prediction 158 172 - -
Pvu10g1256 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 256 - -
Pvu10g1256 277 MobiDBLite consensus disorder prediction 151 173 - -
Pvu10g1256 277 Gene3D NAC domain 11 154 IPR036093 GO:0003677|GO:0006355
Pvu10g1256 277 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 4 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1256 Pvu-Chr10 38991319 38993614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1256 4 159 NAC Transcription Factor Family AT4G35580 50.617 4.96e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu10g1256 NAM 3.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1256 - - gmx:100779816 389.423