Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1255 ATGATAACGATGGAATCTAGAGTGATAGGGGATTACATAATGGGTCCTTCAATCGGGTCGGGTTCGTTTGCCGTGGTATACCGTTCAAGGCACCGAGCTTCCGGTTTGGAAGTTGCAATTAAGGAGATTGATCAGAGACAACTCAGTCCCAAAGTCAAGGAACACCTTTTCAAAGAGATTTCTATCCTTAGCACCATCAAGCACCCCAACATCGTTAGACTCTTCGAGACAATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGGTGCTTACATTCATCGCCATGGCAAGGTTTCTGAAACGGTTGCACGCCATTTCATGAGGCAATTGGCTGCCGGGTTACAGGTGCTTCAAGAAAAGAACCTCATTCACAGAGATTTAAAACCACCGAATTTACTATTGGCAACTACTGCAGCCACACCAATTATGAAAATAGGAGATTTTGGTTTTGCAAGGTCTCTCGCACCCCAGGGGTTGGCTGATACACTATGTGGTTCACCTTATTACATGGCTCCAGAGATAATTGAAAATCAAAAGTACGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATATTGTATCAACTAGTGATTGGGAGGCCACCATTTGACGGAAATAATCAATATCAGCTTTTTCGAAATATTTTGGCATCCACTGAACTCAACTTTCCGCCAGAGGCATTAGAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAACCTTTTACGTCAAAATCCAGATGAGAGATTAACATTCAAAGCATTCTTCAACCACAATTTCCTTCAGAATTCCAGGTCTACCGTACGAAAATTGACGGTTCATCAATCAGGTGGCTCTCTGTCTGAGATGTCTCCAACTACTGCAAGTCGTAAGATGGGGAAGGCTGTTGATGCTGATTCTCGTTTAATGCAGTCTGTCGAGAAAGACTACGTCCTTGTCAATTCCCATTTTGCATCATTGGAGGCGTTTTCTGACTACTTCGATGCATCTGTGCAAGATGATTCCTTATACCGTATTTCTCTAACTCATTCAAAGATTACTGATCTGGATATTGGAGTTGCAAAAAAAACAGAGGATCTGACCTCTTCCTCCAGTAGAGAATTAGAGAATTTAAAAAGCAATAAACTTGAGACATGTGTGGCATCATTTGAGTTTACTCCTTTAAGGAAAGAGCATGAAATTTCCTCACTGCACCCTTCAAACAGGATAGAGTTGTTGCATCAGTATGTGAAGATCCTTAAAGAACTTTCACAACAAAAGTATGGTAAAGGACTGTATCTAGAGTCACTTGCAGTTGAGTTGGTGGTTTTGGCGATATGGAAGAAGGCTTTAGAAATTAGTAACTCTTGGCTAGCCTCTCTTACTGGAAATGAGTTGCCTGAGAGCAGTTCATCTAATGAATCCAGATCTTCAATTAATATGGAGTTATCACAGACTTCAGAACCGAAAATAGATTTTAGTGATCCTCCATCTGTGTCCATGTGGGCCAAACATGAGTTTATTGTTGCTGTTGATCGTGCTGAAAAACTATCATGTCGCATTCAAAATATGGATGGGGCTGCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAGCGCTCTCTCAATCGGGACCAATGGTGCTGTAGATGAATATATGGAGAACAGAGATAGGGCTAATGAATCTTACTCAAGAGCGATGCTGCTACTTTCATTTTTGGTGAGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTCATTGCCACTAATAAAGAGAGAATCTTGCAATACATTCACAAGTTGCAGTCTCGTAAGAAATCTTCATTGGAGTCCTCTTCAAATAAGCCACATTCACTTACATCAAAGTAA 1884 0.4135 MITMESRVIGDYIMGPSIGSGSFAVVYRSRHRASGLEVAIKEIDQRQLSPKVKEHLFKEISILSTIKHPNIVRLFETIQTNDRIYLVLEYCAGGDLGAYIHRHGKVSETVARHFMRQLAAGLQVLQEKNLIHRDLKPPNLLLATTAATPIMKIGDFGFARSLAPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNNQYQLFRNILASTELNFPPEALEELHSDCLDLCRNLLRQNPDERLTFKAFFNHNFLQNSRSTVRKLTVHQSGGSLSEMSPTTASRKMGKAVDADSRLMQSVEKDYVLVNSHFASLEAFSDYFDASVQDDSLYRISLTHSKITDLDIGVAKKTEDLTSSSSRELENLKSNKLETCVASFEFTPLRKEHEISSLHPSNRIELLHQYVKILKELSQQKYGKGLYLESLAVELVVLAIWKKALEISNSWLASLTGNELPESSSSNESRSSINMELSQTSEPKIDFSDPPSVSMWAKHEFIVAVDRAEKLSCRIQNMDGAAEMPDAMEIIFQSALSIGTNGAVDEYMENRDRANESYSRAMLLLSFLVREAENLPLNPPFSLIATNKERILQYIHKLQSRKKSSLESSSNKPHSLTSK* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1255 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pvu10g1255 627 Gene3D Transferase(Phosphotransferase) domain 1 3 339 - -
Pvu10g1255 627 ProSiteProfiles Protein kinase domain profile. 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1255 627 PANTHER BNAC06G18300D PROTEIN 6 602 - -
Pvu10g1255 627 CDD STKc_ATG1_ULK_like 18 269 - -
Pvu10g1255 627 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1255 627 SMART serkin_6 12 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1255 627 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pvu10g1255 627 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 602 IPR045269 GO:0004674|GO:0006914
Pvu10g1255 627 MobiDBLite consensus disorder prediction 465 493 - -
Pvu10g1255 627 SUPERFAMILY Protein kinase-like (PK-like) 8 271 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1255 Pvu-Chr10 38972887 38977458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1255 7 271 CBL-interacting serine-threonine protein kinases AT2G26980 36.667 4.11e-50 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pvu10g1255 Pkinase 7.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1255 - K08269 gmx:100782508 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1255 10 38972887 38977458 Pvu10g1255 10 38972887 38977458 ECH