Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1249 ATGGAAGCACAAAGCTCTCAGCAAACGCAAGTTATCGAGATCAGTGGAGATTTTCCTGATGGCGGAAGAAAGATTTGTGGGGAAGCGCCATGTGGGTTTGCTGATGCCGGATCCATCATCAAGGATTCTGAAGAAAGATCAATTTCTATGCGAAAGCTCCTTATGGCAGTGATCCTTTGTGTTATTTTTATGACTGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTCGGTGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTCTGGTATATGAAGCCATTGACAGAATCATTGCTGGTCCTAAAAGCGTGGATGGTTTCCTAATGTTTTTAGTTTCCGCATTTGGTCTTGTGGTTAATATCATTATGGCTTTGTTATTGGGTCATGATCACGGCCACGGACATGGCCACGGACACGGACATGCCCATGGACATGGCCACAGCCACAGTCACAGTCACAGTCACGGATTTACGGTGTCTACCCATCACGATGCAACAAAACATACAAAAGATGAACACCATCACACACATGATGATCACACAGACCATCACGATGAAAAACATTCAAAAGATGCTATCCATCACACTCATGAAGATCACTTGCACCATCATGATCACGAAGAACTTGCTCAACCTCTTCTTGACGAATCAAAAGTTGAAACGAAGAAGAAGCAAAGGAACATAAATGTACAGGGGGCTTATCTCCATGTACTGGGAGATTCTATACAGAGTATCGGAGTAATGATTGGGGGGGCAGTTATATGGTATAAACCCGAGTGGCAAATAGTTGATTTAATTTGCACTCTAATATTTTCAGTAATCGTTTTGGTGACAACCATCAATATGCTGCGAAATATTTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTCAGCTTGAAAGGGGGCTGTTGGATATGGAAGATGTAGTGGCTGTTCATGAACTGCACATATGGGCCATTACAGTGGGGAAAGTTTTACTAGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACGTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTCTATAACATCAGTCATGTAACCATACAGATAGAGCGCTAG 1254 0.4298 MEAQSSQQTQVIEISGDFPDGGRKICGEAPCGFADAGSIIKDSEERSISMRKLLMAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHGHGHGHAHGHGHSHSHSHSHGFTVSTHHDATKHTKDEHHHTHDDHTDHHDEKHSKDAIHHTHEDHLHHHDHEELAQPLLDESKVETKKKQRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDATQLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1249 417 MobiDBLite consensus disorder prediction 182 200 - -
Pvu10g1249 417 TIGRFAM CDF: cation diffusion facilitator family transporter 50 417 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Pvu10g1249 417 MobiDBLite consensus disorder prediction 205 253 - -
Pvu10g1249 417 PANTHER METAL TOLERANCE PROTEIN A1 1 417 - -
Pvu10g1249 417 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 346 416 IPR036837 -
Pvu10g1249 417 Pfam Cation efflux family 53 339 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Pvu10g1249 417 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 417 - -
Pvu10g1249 417 Gene3D Cation efflux protein transmembrane domain 49 338 IPR027469 -
Pvu10g1249 417 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 340 IPR027469 -
Pvu10g1249 417 MobiDBLite consensus disorder prediction 181 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1249 Pvu-Chr10 38894521 38899462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1249 1 417 Inorganic Solute Cotransporters AT2G46800 66.042 1.85e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1249 K14689 - gmx:100790458 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1249 10 38894521 38899462 Pvu10g1249 10 38894521 38899462 ECH