Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1235 ATGGGGAAGAAGGGAAGTGGTAGTTCCTGGTTAACTGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACACTGACAAAAGGAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGACGAGGAAAAGAAAAGGGAAAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCATGAAGGAGTAAGTAGTGGACACAACACTCAACAAAAGTTGAAGCATGATGTGACGGCAACTACTGAAGGTTCAAGAACAGACCAGGATCAGAAGCATGCACTTGCGGTGGCCGTGGCCACCGCAGAAGCAGCCATGGCCACCGCTCAGGTGGCGGTGGAGGTGGCAAGGTTGACCAAACCTGCTAGCCATGCAAGGGAGCATTATGCTGCTGTTGTGATCCAAACAGCTTTCAGAGGGTATCTGGCAAAAAGAGCACTTCGTGCACTAAAGGGGTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGATGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTCCTTGACCAGCGCATAAGGTCTTCACTTGACGGTAGCAGAAAATCCACTTTCAGTGACACCGCCAGTGTTTGGGACTCGCGGTATCTTCAGGATATTTCTGATAGGAAATCAATATCAAGAGAGGGGAGCAGCATTGCAGATGACTGGGATGAACGTCCTCACACTGTTGAAGAAGTGAAGGCTATGTTGCAGCAGAGAAAGGAAGCTGCAATGAAGAGGGACAAGACCTTATCCCAAGCCTTTTCCCAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGAAATGAAGATGAGTTGGAAGAGAGACCAAAATGGCTAGATCGGTGGATGGCCACAAAGCCATGGGAGAATAGAGGAAGGGCTTCAACTGATCAAAGAGACCCCATTAAGACTGTGGAGATTGACACCTCTCAGCCTTATTCGTATCTAGGAACCAATTACAGAAGATCACATCCAAATTATCAATATAACCCAAACCACCATCAACCACAAAGGCATTCCATTGCTTCCCCACTCCATAGATCTCACCAAAATGGATCCCTTCACCAATCCCCTGCAACCCCTTCTCCTGCCAAGTCAAGGCCCATCCAAGTGCGATCAGCAAGCCCTCGTTGCATCAGAGAAGACAGAAACTACCCCACCTCCCAAACACCAAGCTTGAGGTCCAATTACCATTATACAGGAAACTTGTACCAAAATGGAAGGGCTGTTGGAAGTGGAACTAGTAGTGGTGGTGGTGGTGGTGGTGGTGCTACATTGCCTAATTACATGGCGGCAACGGAGTCTGCAAAGGCTCGAATTCGGTCACAAAGCGCTCCAAGGCAGAGGCCTTCCACACCAGAGAGGGACAGGGTGGGATCAGCAAAGAAGAGGCTTTCTTTTCCTGCTCCTGACCCTTATAGCGTGGGAGTGAGTTACGGAAATTATGGGCATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGGTTGGAGCAGCAGTCAAACTACTCCTCTTGCTGCACTGAAAGTCTTGGTGGTGGTGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGGAGGTGGTTGAGATGA 1641 0.4832 MGKKGSGSSWLTAVKRAFRSPTKDTDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVSSGHNTQQKLKHDVTATTEGSRTDQDQKHALAVAVATAEAAMATAQVAVEVARLTKPASHAREHYAAVVIQTAFRGYLAKRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLDGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSLHQSPATPSPAKSRPIQVRSASPRCIREDRNYPTSQTPSLRSNYHYTGNLYQNGRAVGSGTSSGGGGGGGATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYSVGVSYGNYGHSLRSPSFKSVSGSHFGLEQQSNYSSCCTESLGGGEVSPSSTGDLRRWLR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1235 546 MobiDBLite consensus disorder prediction 521 546 - -
Pvu10g1235 546 MobiDBLite consensus disorder prediction 395 434 - -
Pvu10g1235 546 MobiDBLite consensus disorder prediction 62 77 - -
Pvu10g1235 546 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Pvu10g1235 546 Pfam Protein of unknown function (DUF4005) 388 495 IPR025064 -
Pvu10g1235 546 MobiDBLite consensus disorder prediction 302 483 - -
Pvu10g1235 546 MobiDBLite consensus disorder prediction 1 88 - -
Pvu10g1235 546 PANTHER IQ-DOMAIN 5-RELATED 6 546 - -
Pvu10g1235 546 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Pvu10g1235 546 Gene3D - 123 185 - -
Pvu10g1235 546 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 6 546 - -
Pvu10g1235 546 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Pvu10g1235 546 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Pvu10g1235 546 MobiDBLite consensus disorder prediction 19 61 - -
Pvu10g1235 546 MobiDBLite consensus disorder prediction 318 382 - -
Pvu10g1235 546 MobiDBLite consensus disorder prediction 302 317 - -
Pvu10g1235 546 SMART iq_5 125 147 IPR000048 GO:0005515
Pvu10g1235 546 SMART iq_5 148 169 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1235 Pvu-Chr10 38661798 38664981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1235 10 546 IQD Protein Family AT4G00820 57.885 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1235 - - gmx:100786729 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1235 10 38661798 38664981 Pvu10g1235 10 38661798 38664981 ECH