Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1233 ATGAGCGGGAAGCCGGTGAGACCTCGTACACGTCTGGGGAAGTACGAGCTCGGAAAAACCATTGGCGAGGGAAGCTTTGCGAAGGTCAAGTTCGCAAAGAACGTTGAGAATGGAAACCATGTAGCAATCAAAATCCTCGACCGTAAGCACGTACTCAGCCACAAGATGACGGAACAGCTGAAGAAAGAAATTTCAGCGATGAAGATGATCAATCATCCAAACGTTGTCAAAATTTATGAGGTGATGGCAAGCAAAACAAAGATCTACATTGTCCTAGAGTTGATTAATGGAGGAGAACTATTTGACAAAATAGCTCAGGATGGGAGACTTAAAGAGGATGAAGTAAGAAGTTATTTTCACCAACTAATCAATGCAGTTGACTACTGCCATAGTAGAGGGGTGTACCACAGAGATTTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGGTATTCTGAAAATTACAGATTTTGGATTAAGTACCTACGCACAGAAGGAGGATGAACTTCTCCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTCAAGGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCCTGCGGGGTCATTCTCTTTGTGCTTATGGCTGGTTACTTGCCCTTTGATGAGCCAAGTCAAATGGCATTGTACAAAAAAATTGGCAAGGCTCAATTTACATGTCCATCATGGTTTTCCTCTGAGGCAAAGAAGCTATTGAAGCGTATTCTTGATCCAAACCCTTTAACAAGGATAAAAATTCCTGAAATCATAGAAGATGAGTGGTTCAAAAAAGGATACAAACCAGCAATTTTTACAGAGGAAGAGGATGTCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCCAAGGAAAATTTTGTGACAGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCTCATATCTAGGTCTCAAAGCTTCAATCTTGAAAATTTGTTTGAGAAGGAGACAAATGGGATTGTTAAGAAAGAAACACATTTTACGTCACAACATCCTGCAAATGAAATCATGTCAAAAATTGAGGAAGCTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAGAGCGGAAGGAAGGGACACCTCTCAGTAGCTACAGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTTCGAAAGACTGGGGGTGACACACTGGAGTTTCATAAGTTTTACAAAACCTTTTCATCAGGGTTGCAAGACATAGTGTGGCATTCTGAAGCAAAAGTATGA 1311 0.4134 MSGKPVRPRTRLGKYELGKTIGEGSFAKVKFAKNVENGNHVAIKILDRKHVLSHKMTEQLKKEISAMKMINHPNVVKIYEVMASKTKIYIVLELINGGELFDKIAQDGRLKEDEVRSYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGILKITDFGLSTYAQKEDELLRTACGTPNYVAPEVLKDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPSQMALYKKIGKAQFTCPSWFSSEAKKLLKRILDPNPLTRIKIPEIIEDEWFKKGYKPAIFTEEEDVNVDDVAAAFNDSKENFVTERKEKPVSMNAFELISRSQSFNLENLFEKETNGIVKKETHFTSQHPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKTFSSGLQDIVWHSEAKV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1233 436 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 9 433 - -
Pvu10g1233 436 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1233 436 Pfam NAF domain 307 368 IPR004041 GO:0007165
Pvu10g1233 436 Gene3D Transferase(Phosphotransferase) domain 1 95 296 - -
Pvu10g1233 436 PANTHER - 9 433 - -
Pvu10g1233 436 SUPERFAMILY Protein kinase-like (PK-like) 12 296 IPR011009 -
Pvu10g1233 436 CDD CIPK_C 311 425 - -
Pvu10g1233 436 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1233 436 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1233 436 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pvu10g1233 436 Gene3D Kinase associated domain 1, KA1 304 431 - -
Pvu10g1233 436 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Pvu10g1233 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pvu10g1233 436 Gene3D Phosphorylase Kinase; domain 1 6 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1233 Pvu-Chr10 38619152 38624851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1233 9 434 CBL-interacting serine-threonine protein kinases AT1G01140 73.441 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu10g1233 Pkinase 5.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1233 - - gmx:100794136 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2654 9 36987248 36994102 Pvu10g1233 10 38619152 38624851 PCT