Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1226 ATGGGTCAGTGCTACGGCAAGTCCAATCTCACGCCGCAAAATGACGCCGCCGCCGCAGAGGAAACCACCGTCGACACAGTTGTCGCGGTGGCCGGATCCGCTGACGCCCCGCTCTCTCCACTGCCGGTGAAGGGCACGCCGGCGCGGGCCAGTCCATGGCCGAGTCCCTACCCGCATGGTGGCGGCGTGACGCCGTCCCCGGCGAGAGGCACGCCGAGGAGATTTTTTCGGCGGTCGTTCGCGCCTCCGTCGCCGGCGAAGCACATAAGGGCGTCGCTAGCGAAGCGGCTTGGGCACGGGAAGACGCCTAAAGAGGGGCCGATCCCGGAGGAAGAAGCGGCGGCGGTGGCGACTGAACAGTCGCTGGATAAGAGCTTTGGGTACGGTAAGAATTTTGGGGCGAAATATGAAATTGGGAAAGAAGTGGGTCGAGGGCATTTTGGTCATACTTGTTATGCTAAGGGGAAGAAGGGCGAACTCAAAGACCAACCTGTTGCTGTTAAGATCATTTCCAAGGCGAAGATGACTACTGCAATAGCAATTGAAGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATGAACATCTTGTCAAATATCATGATGCTTTTGAAGATGCCAACAATGTGTACATAGTAATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATTCAGAGGAGGATGCCAAGGTTATAGTTTTGCAGATCCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGGGACCTTAAACCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAGATGCTGACATGAAGCTTATTGATTTCGGTCTATCTGACTTCATCCGGCCAGATGAACGGCTGAATGACATTGTTGGGAGTGCGTATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTTGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTTCTGCCTCTGCAGAGGCCAAGGACTTTGTAAAACGGCTTCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAAGTCATCCTTGGTTGAGGGATGAAAGCCGTCCAATCCCTTTAGACATATTAGTTTATAAACTAGTGAAGGCTTATCTTCTTGCAACACCACTCAAACGTGCAGCAGTGAAGGCACTTTCAAAAGCCTTGCCAGAGGATGAATTGCCCTACCTTAGGGCACAATTCAGATTGTTGGGACCCAATAGAGACGGACTCATCTCCCTTGACAATTTCAAAATGGCTCTTGTACACAATGCAACTGATGCAATGAGGGAGTCAAGGGTTGTTGACATCATAAATGCGATGGAGCCACTTGCCTATAGAAAGATGGACTTTGAAGAATTTTGTGCAGCTGCAATTAGCACATACCAATTGGAAGCACTTGATAGGTGGGAAGACATTGCCTCAACTGCATTTGAACATTTTGAGACTGAAGGGAACCGTCTGATATCAGTTGAAGAATTGGGCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAATTCTCAAAGACTGGATAAGAAATAGTGATGGAAAGCTTAGCTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGACACAGGTAG 1767 0.4765 MGQCYGKSNLTPQNDAAAAEETTVDTVVAVAGSADAPLSPLPVKGTPARASPWPSPYPHGGGVTPSPARGTPRRFFRRSFAPPSPAKHIRASLAKRLGHGKTPKEGPIPEEEAAAVATEQSLDKSFGYGKNFGAKYEIGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHEHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPSASAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDESRPIPLDILVYKLVKAYLLATPLKRAAVKALSKALPEDELPYLRAQFRLLGPNRDGLISLDNFKMALVHNATDAMRESRVVDIINAMEPLAYRKMDFEEFCAAAISTYQLEALDRWEDIASTAFEHFETEGNRLISVEELGRELNLGPSAYSILKDWIRNSDGKLSLLGYTKFLHGVTLRSSNPRHR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1226 588 SMART serkin_6 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1226 588 CDD STKc_CAMK 135 397 - -
Pvu10g1226 588 Pfam Protein kinase domain 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1226 588 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Pvu10g1226 588 PANTHER CDPK-RELATED KINASE 3 52 581 - -
Pvu10g1226 588 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Pvu10g1226 588 ProSiteProfiles Protein kinase domain profile. 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1226 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Pvu10g1226 588 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Pvu10g1226 588 Gene3D Transferase(Phosphotransferase) domain 1 226 407 - -
Pvu10g1226 588 MobiDBLite consensus disorder prediction 47 61 - -
Pvu10g1226 588 PANTHER SERINE/THREONINE-PROTEIN KINASE 52 581 - -
Pvu10g1226 588 MobiDBLite consensus disorder prediction 33 116 - -
Pvu10g1226 588 SUPERFAMILY Protein kinase-like (PK-like) 128 414 IPR011009 -
Pvu10g1226 588 SUPERFAMILY EF-hand 425 577 IPR011992 -
Pvu10g1226 588 Gene3D - 408 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1226 Pvu-Chr10 38527831 38535213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1226 1 582 EF-hand Containing Proteins AT3G50530 58.571 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu10g1226 Pkinase 9.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1226 - - gmx:100796256 1055.43