Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1224 ATGAGTTTTGAAAAGTTGATTCTTGAAAATAAAACCCCCTTCAACATTCATTGTTTTCCACGAAAAACTTCAGAACAAATATCTAGCTCAAACCTTTGTTCTCTTCTGATGTGTGAGAGTGAAGAAAACAACTTGGGAGAAGTTCCAGTGGCAAATCGTCCATGCCCTGATCATCACCCGCAGAGAAAGAAAGTGGTGTTTAAAGAGATTCCAAAAGGGTTTTTTCCAATCAAGGTAGGGCAAGGTGAAGAGCAAGAGAAAATTGTGATGCCTATTATGTATCTCAACCACCCTTTGTTTTCTCAGCTACTGAAAGAGGCAGAAGAAGAGTATGGTTTTGATCAGCAAGGCACCATAATTATCCCTTGCCATTTGAAGGACTTTAGGTACGTTCAAGCCCTCATTGATAAGGAGATTTCCACCCAACACCATGCCATTAGCTGTTTTAGGTCTCCACGTTAG 462 0.4048 MSFEKLILENKTPFNIHCFPRKTSEQISSSNLCSLLMCESEENNLGEVPVANRPCPDHHPQRKKVVFKEIPKGFFPIKVGQGEEQEKIVMPIMYLNHPLFSQLLKEAEEEYGFDQQGTIIIPCHLKDFRYVQALIDKEISTQHHAISCFRSPR* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1224 153 Pfam Auxin responsive protein 68 134 IPR003676 GO:0009733
Pvu10g1224 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 60 144 IPR003676 GO:0009733
Pvu10g1224 153 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 60 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1224 Pvu-Chr10 38492595 38495726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1224 27 136 Calmodulin-binding Proteins AT3G43120 33.636 4.24e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1224 - K14488 pvu:PHAVU_010G117400g 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1217 6 23138316 23139125 Pvu10g1224 10 38492595 38495726 PCT