Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1221 ATGACAAAGCACATTGATAACCTGTGGGTGTTGGCCTTGGCCTCCAAATGTACTCAAGAGAACATTGCATGGTCACTCTTGATCATGGCCTCTCTCTGGCTAACCATGACTTTCTTCTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTCCTTCCATTCCTGGAAAAAGCCCACTTCAACCTCCACCAACAACCTTAACCTTTCCTCGGATACTGACAAAATCATTCTCGGTCCCAGAGGCTACCCTATGATCGGGAGCTTCAAACTCATGGCCTCCCTCGCGCACCACCGTATCTTTGCGGCGGCCAAAGCATGCAACGCCATGAGACTCATGGCGTTCAGCCTCGGAGACACACGCGCCATAGTCACGTGCCATCCGGATGTGGCCAAGGAGATTCTCACCAGCTCTGTCTTTGCTGATCGTCCAATCAAGGAATCTGCTTACAGCCTCATGTTCAACCGCGCCATCGGTTTTGCCCCGTACGGTGTCTACTGGCGCACCCTCCGCCGCATCGCCGCCACGCACCTCTTCTGCCCCAAGCAAATCAAGGCCTCCGAGTTCCAACGGGCGGAAATCGCCGCCCAAATGACCCGTTCCTTCTGGAACCGCCATGGTGGCTTTCAGCTTCGCGATGTTCTGAAAAAAGCTTCTCTTAACAACATGATGTGGTCTGTCTTTGGACAACGATATAAGCTGGATGAGGCAAACGCAGAAATGGAAGAGCTTTCCCAGTTGGTGGAACAGGGGTACGATTTATTGGGTACCCTCAATTGGGGTGACCATATCCCTTTTCTCAAAGACTTTGACCTCCAGAAAATCCGGTTCACTTGTTCAAAACTCGTCCCCAAAGTGAACCGGTTCGTTGGTTCAATCATCGCCAACCATCAAGCCGACATAACCCAAACCAACCGCGATTTCGTTCATGTTTTGCTCTCTCTCCAAGGTCCAGATAAATTGTCTCACTCGGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACCGACACGGTGGCGGTTTTGATTGAGTGGATATTAGCGAGGATGGTGCTTCATCCCGAGGTGCAAAGGAGGGTGCAAGAGGAGCTGGACAAGGTGGTTGGTGGTGGGTCACGTGCCTTGACGGAAGATGATGTGGCGGTGACGGTCTATCTTCCAGCGGTGGTGAAGGAGGTTCTGAGGCTGCACCCTCCAGGCCCGCTTCTCTCCTGGGCCCGCTTGGCCATCACTGATACCACCATTGATGGGCATCATGTGCCCGCAGGGACCACGGCTATGGTTAATATGTGGGCCATAGCCAGGGACCCAGATGTGTGGGTGGACCCACTGGAATTTAAGCCGGAGAGGTTCCTGGGCTTGGAGACGGAGTTTTCTGTTTTCGGGTCGGATCTGAGACTTGCTCCATTCGGGTCGGGTAGGAGGACTTGCCCCGGAAAGACTCTGGGTTTGAGCACGGTGACCTTCTGGGTGGCCAGTCTCTTGCACGAGTTTCAATGGCTACCATCTGATGAAGCCCGTGGGGTTGATCTAACTGAGGTGCTCAGGCTCTCTTGCGAAATGGCCAACCCCCTCTGTGTTAAAGCCCGTCCTAGGCGTGGACTAAGCCCTTAA 1626 0.5344 MTKHIDNLWVLALASKCTQENIAWSLLIMASLWLTMTFFYWSHPGGPAWGKYYSFHSWKKPTSTSTNNLNLSSDTDKIILGPRGYPMIGSFKLMASLAHHRIFAAAKACNAMRLMAFSLGDTRAIVTCHPDVAKEILTSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEFQRAEIAAQMTRSFWNRHGGFQLRDVLKKASLNNMMWSVFGQRYKLDEANAEMEELSQLVEQGYDLLGTLNWGDHIPFLKDFDLQKIRFTCSKLVPKVNRFVGSIIANHQADITQTNRDFVHVLLSLQGPDKLSHSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQRRVQEELDKVVGGGSRALTEDDVAVTVYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGHHVPAGTTAMVNMWAIARDPDVWVDPLEFKPERFLGLETEFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVASLLHEFQWLPSDEARGVDLTEVLRLSCEMANPLCVKARPRRGLSP* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1221 541 Coils Coil 236 256 - -
Pvu10g1221 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Pvu10g1221 541 PANTHER CYTOCHROME P450 78A7-RELATED 1 538 - -
Pvu10g1221 541 Pfam Cytochrome P450 81 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 PANTHER CYTOCHROME P450 78A6 1 538 - -
Pvu10g1221 541 Gene3D Cytochrome P450 69 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1221 541 SUPERFAMILY Cytochrome P450 81 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1221 Pvu-Chr10 38413620 38415853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1221 1 537 Cytochrome P450 AT2G46660 63.187 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1221 K20619 - gmx:100798388 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1221 10 38413620 38415853 Pvu10g1221 10 38413620 38415853 ECH