Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1182 ATGTTGACGATGATCATCGTTGCGCTCATCACGGCCATGCTTTTTGGATTCTGCATTGCTCCAGTCAACGGCAGACGGAGGAGGAACAGAGCCGTCGGGTTCTTCCATCCGTACACTAACGACGGCGGCGGCGGGGAGAGGGTGCTCTGGTGCGCCGTCAGAGGCATCCAAGAGGAGATCCCTGACCTTGACTGCTATATCTACACCGGCGATCATGACGCCACCCCTCAATCGCTGATGGCTCGAGCCCTCGATCGCTTTGGGGTCACGCTCCTCTCTCCTCCAAAGGTGGTTCATTTGTACAAGAGAAACTGGATCGAAGAAACCACTTATCCGCACTTTGCAATGATTGGTCAAAGCTTACTCCTTTATATTACTTTGACACAAGTGGATATGCTTTTACATATCCATTTGCCTGGTTGTTTGGATGTAAACTGTGAATCTTACAATTCTACTGTTCAATCATTTCTCAATCACTCTTGCCCTATCACTGATCGACAAAACATTGGAGACCTGGAAGCTTTCAATTTTGGAATGTTCATAGAAGCTCTAAAGTCTCGAGTGGTAGAATCAACTACTGATTTTCATCACAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAGTCTAAGTTCAGTTGGGCAAGGTCTCGAGACAAGTACTTATGTAGGGGAGATAATCTTTGCTCTCTCCATTGCTGTCTCTGGATTGGTTCTATTTGCATCACTTATTGGAAACATGCAGAAATATCTACAATCTCCCACTGTCAGAGTTGAAGAGATGAGAATCAAAAGGCAGAGAGATTGTTGCGTGAAGCAGAAAAAAGGATTCAAAATTTGGAGAAAGAGGAAGGGTCCTCACCAAGCTTTGTAG 873 0.4582 MLTMIIVALITAMLFGFCIAPVNGRRRRNRAVGFFHPYTNDGGGGERVLWCAVRGIQEEIPDLDCYIYTGDHDATPQSLMARALDRFGVTLLSPPKVVHLYKRNWIEETTYPHFAMIGQSLLLYITLTQVDMLLHIHLPGCLDVNCESYNSTVQSFLNHSCPITDRQNIGDLEAFNFGMFIEALKSRVVESTTDFHHKFFYCFWWGLRSLSSVGQGLETSTYVGEIIFALSIAVSGLVLFASLIGNMQKYLQSPTVRVEEMRIKRQRDCCVKQKKGFKIWRKRKGPHQAL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1182 290 Pfam ALG11 mannosyltransferase N-terminus 30 122 IPR031814 -
Pvu10g1182 290 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 144 266 - -
Pvu10g1182 290 Pfam Ion transport protein 182 257 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu10g1182 290 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 144 266 - -
Pvu10g1182 290 SUPERFAMILY Voltage-gated potassium channels 122 273 - -
Pvu10g1182 290 Gene3D - 97 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1182 Pvu-Chr10 37854737 37859225 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1182 146 269 Ion Channels AT1G01340 62.903 4.25e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1182 K03844 - gmx:100808662 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1182 10 37854737 37859225 Pvu10g1182 10 37854737 37859225 ECH