Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1168 ATGGAAGAGAGTACGAAGTGTGAACAAGTTGGTGTCATTGGTGAGTTAATGCTAGGGGAGGAGCTAACAAAGAAGCTTTATAGCCAACTATTCCCATCATCTTCTGTATCATCATCATCATCATCATCCACCTCATCTCGTGACACAAATGAAGTCTTAATTGAGAAAATAATTTCCACCATGGAGAAGGCAATTGCCATGGTGAATTGTATGGCTAATGTAGGAGAAAGTAAGGCAAAGAATGGCAGCATGATGGATTCCCATTGCTCTTTTATAAATGGTAGCCCCAAAAGTGAGGTCATGGAGCCTGAGGTTGAGCACAGAGATGTCTCTAAGAAAAGAAAGACCATGCCAAGGCGGAGAGACCAAGTGAAGGTGTGCTTGGAAACAGCAGAAGGAACTAAGGAAGATGGCTATAGCTGGAGAAAATATGGGCAGAAGGATATTCTTGGAGCCAAGTTTCCAAGGGCATATTACAGATGCACATATAGAAACATACAAGGATGTCTGGCCACTAAGCAAGTGCAAAAGTCAGATGAAGATCCAATGGTAAACGAGATAACATACATAGGGAGACACACATGCACCCAAGCAAGTCACTTGAGCAAGGCAGTGGTATCCCCATCAAAAACCAAGACGGTAATCGAAGAAAACCAGCACCAAACCAATCAAAAGAATCAACCGCAGCAAGAGAAAATAGAGCACCCCCCAGAGAAAATTTTCTCCTTTGGATCACAAGTTGAAGTTAAAGTAGAGGACTTGGACCACAAGCAGGGCATATTCCCATCATTTTGCTTCTCTTCTCCATCAATAGGGTCAGAAAACGAGGACAACAGCAACATATTCCCGTACTCCATGATTGAGAACAACTTAATGGAAAGCTTCTCTCCTGCATTCATATCTCCAACAACTTCAGAATCAGACATGTTCTGCCACTGGGAGAGCACTGGACTAGGCCAAAGTGTGCATAGCTCCACTTCAGATATCACTGATATAGTTTCCACACCAACTTCAGTCACCAATTCACCAATAATGGACTTTGATTTCTTGCTTGATAAGATCGATTTCGACATAGATTTCCCTATGGCAACCACAGAACTTTGCACGTGA 1110 0.427 MEESTKCEQVGVIGELMLGEELTKKLYSQLFPSSSVSSSSSSSTSSRDTNEVLIEKIISTMEKAIAMVNCMANVGESKAKNGSMMDSHCSFINGSPKSEVMEPEVEHRDVSKKRKTMPRRRDQVKVCLETAEGTKEDGYSWRKYGQKDILGAKFPRAYYRCTYRNIQGCLATKQVQKSDEDPMVNEITYIGRHTCTQASHLSKAVVSPSKTKTVIEENQHQTNQKNQPQQEKIEHPPEKIFSFGSQVEVKVEDLDHKQGIFPSFCFSSPSIGSENEDNSNIFPYSMIENNLMESFSPAFISPTTSESDMFCHWESTGLGQSVHSSTSDITDIVSTPTSVTNSPIMDFDFLLDKIDFDIDFPMATTELCT* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1168 369 Gene3D WRKY domain 120 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g1168 369 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g1168 369 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g1168 369 SUPERFAMILY WRKY DNA-binding domain 133 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g1168 369 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 366 - -
Pvu10g1168 369 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 366 IPR044810 GO:0003700
Pvu10g1168 369 ProSiteProfiles WRKY domain profile. 130 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1168 Pvu-Chr10 37576223 37578860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1168 7 261 WRKY Transcription Factor Family AT4G23810 37.906 3.84e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu10g1168 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1168 - - gmx:100170747 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1168 10 37576223 37578860 Pvu10g1168 10 37576223 37578860 ECH
Pvu2g1682 2 30515098 30516646 Pvu10g1168 10 37576223 37578860 ECH
Pvu6g1172 6 22762481 22764805 Pvu10g1168 10 37576223 37578860 PCT