Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1158 ATGTGCTCATTATCATTAGGTCTTCCCCACCTCCCTCACTTCCCCAAACCCCCTCCACACCCTTCTCCTTCACCTTCACCTTCACCTCCAAACCCAAAGTACCCATTTTCCACCACACCCACCAACAATGCTTCAACACCCTTCTTCCCCACATACCCTTCTCCCCCACCTCCTCCTTCTCCTTCAGCTTTTGCTTCTTTCCCTGCTAACATATCCTCCCTCATCCTTCCACAATCCCCCAAGTCCAAATCTTCCTCAAAAAAACTCGTCGCCGTTGCCATCGCCGCCGTCGCCTGCGCTCTGGCCGTTCTGGTTCTCTCCGCCTTTGTCTACTTCCGCCGCCGTCGTCAAAGCTACTCTTCTGACGAGAAAACCCTCAGATCCGACAGCAGCATCCGCCTCTTCCCCCGTGAAGCTTCTGCTGCCCCTGGCGGCGGCCGCAAACCAAGAAACACGTCTTCTACCAGCTCCGAGTTTCTCTACCTTGGCACCATTGTTAACTCCCGTGGCGGCAGCGTCGATGAGCTCTCTGACCCGCATGCTGCCGCTTTGAACCCTCGTAAAATGGACTCGCCGGAGCTTCAACCGCTACCGCCTTTGGCGAGACAGGCTTCCAGGCTTAGAGAGGAAACGGCGGCGATGGTGGAGGATGATGAAGAGTTCTACTCGCCGAGAGGGTCGTTGAACGGAAGAGAAGGCTCCACCGGAACCGGATCGGGTTCCCGACGAGTTTTCTCCGCCATTGCCGGTGAAAATTTAGTTGGTCGTAGCAGCAGTGAGTCAACCAGTTCTTCTTACTCTTCTTCCTCTTCACCTTCCCCGGATCACTCTCATTCCATTAGTCTCTCTCCTCCAGTGAGCATAAGCCCCAGAAGATCACAACCCAAGTCGCCTGAAAATACCATAGCACACCATTCTCCACCACCACCTCCAGCAGCAATTAGAAGATCTCCGTCCTTGTCCTCACTGTCATCGCCGTCACCGGCTTTCGGGCAGCATATGCCGTCGTCGTCAATGTCGTCCACGCCGGAGCGGAGGGACTGTCAGTCGCCGTCGCTGTCTCCGCTTACTCTGTCGCCGAGGAAAAACCCTAACCCAGATGGTGAATCTCCCCCAGGACTTGTTCTACTCGAAAAAACGCAATCTTTTGGTTCGTCTAAGTCCAAAAGCGACACTGGGTCGCCGAGATTGTCCAATGCTTCTTCCATTGGAAAGTCCTCGGCGTTTTCTCTGCCGTCGCCGGATAAAGGGATGAACTTGCATCATGGGTTGGATCAGTCTCCGACCATTTCCGATGTTTCGGATCGGTTTAGACATTCTCCTCTGTCATCATTACCTTTGTCACCGACATTACTTTCATCGCCGGAGAGGGAGTTGAGCCCTCAGCCCCAGCCTCAACCTCAACCTCAACTACCACCTACACGAAAACACTGGGAGATTCCTGACTTGTTGACACCAATCGGCGAAACACCGATTTTCTCAGCTCCTCAGAGGAAACAATGGGAAATTCCGGTTTTTTCTGTACCAATTGCTCCGTCTAGCAGCAGTGTTTTGGCCCCTCCACCGCCGCCGCCACCACCACCACCACCACCTCCGCCAGTTCCGCGGCAACGTAAGCAGTGGGACATGCCAGTGCCTTCTCCCGTGACGCCGGTGGGTCAGCAGGTTTCGAGGCCGCCGGCGCTTACGCCGCCTTCTAGGCCTTTTGTGTTGCAAACTCCAAATACAATGGTTTCTCCGGTGGAGTTGCCACCTGGTAGTTCTCTAAATTTTGAGGAGAGCTCTGAGGAGACATCTAAACCTAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATTGAAACTTTGTTTGTAGTGAACACGCCAAACCCAAAACCGAAGGACACAGCTCCTCGCCCAGTTCTTTCCTCGCATAATCAAGAGGATAGGGTGCTGGATCCTAAAAAGTCCCAGAACATTGCTATCTTGTTAAGAGCACTTAATGTGACTGTAGAAGAAGTGTGTGAATCACTTTTAGAAGGCATTACTGATACACTTGGAACTGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAGGAAGAACGCAAATTGAAGGAACATAAAGACGATTCTCCAACCAAGCTTGGTCCTGCTGAGAAATTCTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGTCAATTTTGAGTCCGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTTTGGAGGCTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCCGTGCTCAAAACTGGCAACCGGATGAATGTGGGGACGAACCGTGGCGATGCACATGCATTCAAACTTGATACACTTCTCAAGCTTGTTGATGTCAAAGGCGCAGATGGCAAAACCACTCTACTTCACTTTGTTGTACAAGAAATCATCAGAACTGAAGGTGCTCGTCTCTCAGGCACCAACCAAACACCAAGTTCGAATTTGAACGACGAAGCCAAGTGTAGACGGCTCGGCCTGCAAGTAGTGTCCGATCTGATTTCCGACCTGGCGAATGTGAAGAAGGCCGCCGCAATGGACTCTGAAGTCCTAAGCAGCGAGGTATCCAAACTCTCCAAAGGAATGGCACACATTGCAGAGGTTGTGAAGTTGAATGAAGCAGCAGGATCAGATGAAAGCAGCAGGCAGAAGTTCAGAGAGTCAATGAACAAGTTCACGAGAATGGCTGAGGAGGAGATTTTAAAAGTGCAAGCACAAGAAAGTGTTGCTTTATCCCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACTTGTCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGACTTCTTAACAGTTCTTGATAGGGTGTGCAAAGAAGTTGGCATGATAAACGAGAGAACCATGGTTAGTTCTGCACACAGATTCCCTGTCCCAGTGAACCCTATGCTTCCACAACCCCTTCCTGGTCTTGTTGGAAAGAGACAATACAATTCCTCAGATGATGATGATACTGCATCTCCTTAG 3144 0.5035 MCSLSLGLPHLPHFPKPPPHPSPSPSPSPPNPKYPFSTTPTNNASTPFFPTYPSPPPPPSPSAFASFPANISSLILPQSPKSKSSSKKLVAVAIAAVACALAVLVLSAFVYFRRRRQSYSSDEKTLRSDSSIRLFPREASAAPGGGRKPRNTSSTSSEFLYLGTIVNSRGGSVDELSDPHAAALNPRKMDSPELQPLPPLARQASRLREETAAMVEDDEEFYSPRGSLNGREGSTGTGSGSRRVFSAIAGENLVGRSSSESTSSSYSSSSSPSPDHSHSISLSPPVSISPRRSQPKSPENTIAHHSPPPPPAAIRRSPSLSSLSSPSPAFGQHMPSSSMSSTPERRDCQSPSLSPLTLSPRKNPNPDGESPPGLVLLEKTQSFGSSKSKSDTGSPRLSNASSIGKSSAFSLPSPDKGMNLHHGLDQSPTISDVSDRFRHSPLSSLPLSPTLLSSPERELSPQPQPQPQPQLPPTRKHWEIPDLLTPIGETPIFSAPQRKQWEIPVFSVPIAPSSSSVLAPPPPPPPPPPPPPPVPRQRKQWDMPVPSPVTPVGQQVSRPPALTPPSRPFVLQTPNTMVSPVELPPGSSLNFEESSEETSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTAPRPVLSSHNQEDRVLDPKKSQNIAILLRALNVTVEEVCESLLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIVNFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPSSNLNDEAKCRRLGLQVVSDLISDLANVKKAAAMDSEVLSSEVSKLSKGMAHIAEVVKLNEAAGSDESSRQKFRESMNKFTRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYNSSDDDDTASP* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1158 1047 ProSiteProfiles Formin homology-2 (FH2) domain profile. 593 1019 IPR015425 -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 379 413 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 255 491 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 515 539 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 11 36 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 49 63 - -
Pvu10g1158 1047 Pfam Formin Homology 2 Domain 595 993 IPR015425 -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 568 594 - -
Pvu10g1158 1047 PANTHER FORMIN-LIKE PROTEIN 1 14 1047 - -
Pvu10g1158 1047 SUPERFAMILY Formin homology 2 domain (FH2 domain) 523 1005 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 643 666 - -
Pvu10g1158 1047 SMART it6_source 593 1008 IPR015425 -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 424 459 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 255 301 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 1026 1047 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 214 242 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 1 63 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 317 364 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 228 242 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 512 602 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 460 474 - -
Pvu10g1158 1047 MobiDBLite consensus disorder prediction 120 155 - -
Pvu10g1158 1047 Gene3D Formin, FH2 domain 590 1002 IPR042201 -
Pvu10g1158 1047 PANTHER FORMIN-RELATED 14 1047 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1158 Pvu-Chr10 37400547 37406169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1158 27 298 FH2 protein (formin) Gene Family AT3G25500 43.056 1.56e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1158 - - var:108322602 1525.38