Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1136 ATGGGAAACAGTGAGGAAGGGAAATCTGTTAAAACTGGAAGTCCTTCTTCACCAGCTACAACTGAACAGACCAATCAGACAAACCAGCCTAACTTTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCGAGAGTCAACATTCCTCCATACTTCAACTCGGCTGTGGCTTCTGGTCATGCTCCACACCCATACATGTGGGGTCCACCACAGCCTATGATGCCACCTTATGGGCCACCATATGCAGCATTTTATTCTCCTGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACATTCACACGGTCAAGGAGTTCCATCCCCACCTGCTGCTGGGACTCCTTCAAGTGTAGATTCACCAACAAAATTATCTGGAAATACTGATCAAGGGTTAATGAAAAAATTGAAAGGGTTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCGGAGCTTGGAGCTGAAAACAGGCTGTCGCAGAGTGTGGATACTGAGGGTTCTAGCGATGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAATGAAAAGAAGCCGAGAGGAAACATCAACCACTGATGGAGAAGGGAAAACTGAGACACAAGATGGGCCAGTTTCCAAAGAGACTACATCTTCGAAAATGGTTATGTCTGCTACACCAGCTAGTGTTGCAGGAAAGTTAGTTGGTCCTGTAATTTCTTCAGGTATGACCACAGCACTGGAGCTTAGGAAACCTTTGACTGTTCATTCTAAGGAAAATCCCACGAGTGCCCCACAACCTTGTGCAGCTGTGCCTCCTGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGGAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAAAATGTGTCACTGAAGTCAGAAATAACTCAATTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGAGAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGGACAGCATTGACAGCAAGAGGTCTACACCTGTAAGTACTGAAAATTTGCTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAAGTGCAGAGAATGAGAGTGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTTGCTGCTGGGTGA 1281 0.4528 MGNSEEGKSVKTGSPSSPATTEQTNQTNQPNFHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAFYSPGGVYTHPAVAIGPHSHGQGVPSPPAAGTPSSVDSPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAELGAENRLSQSVDTEGSSDGSDGNTAGANQTKMKRSREETSTTDGEGKTETQDGPVSKETTSSKMVMSATPASVAGKLVGPVISSGMTTALELRKPLTVHSKENPTSAPQPCAAVPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITQLTEGSEQMRMENSALREKLRNTQLGQREEIILDSIDSKRSTPVSTENLLSRVNNSSSNDRSAENESDFCENKPNSGAKLHQLLDTNPRADAVAAG* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1136 426 MobiDBLite consensus disorder prediction 160 188 - -
Pvu10g1136 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 426 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pvu10g1136 426 SUPERFAMILY Leucine zipper domain 284 339 IPR046347 GO:0003700|GO:0006355
Pvu10g1136 426 MobiDBLite consensus disorder prediction 113 132 - -
Pvu10g1136 426 PANTHER G-BOX-BINDING FACTOR 3 1 426 - -
Pvu10g1136 426 MobiDBLite consensus disorder prediction 255 309 - -
Pvu10g1136 426 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Pvu10g1136 426 MobiDBLite consensus disorder prediction 370 426 - -
Pvu10g1136 426 MobiDBLite consensus disorder prediction 103 134 - -
Pvu10g1136 426 MobiDBLite consensus disorder prediction 204 226 - -
Pvu10g1136 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Pvu10g1136 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Pvu10g1136 426 MobiDBLite consensus disorder prediction 370 393 - -
Pvu10g1136 426 MobiDBLite consensus disorder prediction 1 32 - -
Pvu10g1136 426 MobiDBLite consensus disorder prediction 279 309 - -
Pvu10g1136 426 MobiDBLite consensus disorder prediction 160 232 - -
Pvu10g1136 426 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Pvu10g1136 426 Gene3D - 284 337 - -
Pvu10g1136 426 MobiDBLite consensus disorder prediction 189 203 - -
Pvu10g1136 426 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Pvu10g1136 426 Pfam Disordered region downstream of MFMR 132 262 - -
Pvu10g1136 426 Coils Coil 308 328 - -
Pvu10g1136 426 Pfam G-box binding protein MFMR 1 98 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1136 Pvu-Chr10 36976049 36980812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1136 1 426 bZIP Transcription Factor Family AT2G46270 48.394 1.17e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu10g1136 MFMR_assoc 9.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1136 K09060 - gmx:547789 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1136 10 36976049 36980812 Pvu10g1136 10 36976049 36980812 ECH
Pvu6g1150 6 22574895 22578680 Pvu10g1136 10 36976049 36980812 PCT