Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1086 ATGTCTTTTCCTACTTATAGCATCTTATCTTTCTCTCACTCAAAAAAAAAGTCAGCGCCTTTTTATTTTATTTGTCCCTCTCTCTCAACACAGGGTGTACACCAGACTTTTTCAGACCTTGTCTTTATCTTTACGGTTATGGAAGCAGATTGGGATCTCCACGCCGTCGTCAGAAGCTGCACCACCACTTCCTCGGCCGCCACCACCATCTCATCCACCACCTCATCTTCTGGCTTTGGGGCTTCTGCCCCACCTTCTACTTCCTGCAGCTTCTTCTCGGCTTACAACCCTGCTGAACAAGGAGACCAAGTGATGTCGGAGAACCCTTATGAAGCAAGGCCTTCCATTGAAGAGCTTCAGGAGCTTTGCAAGCCTTTCTTCCTCAAACCGCAGCCTCACACCTTCCAACCCTCTTCTCCTCTCTCTTCTTTTTCTTACTCGTCAGTGCCCAAATCACCTAGCAGCCAGCAGGAACAGAAGCAGCCTCCCCATGCCGGTTCTGCCTCCACCCCAAGAACCAAAAGAAGGAAGAATCAGGTTAAGAAGGTTTGTGAAGTAGCAGCTGAGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGGTCACCATATCCAAGGGGATATTACAGATGCAGCAGCTCAAAAGGATGTTTAGCAAGGAAACAAGTGGAGAGGAAAAGATCCGACCCAACAATGTTCATAGTCACATACACAGGTGAACACAACCACCCTGCTCCTACTCATAAAAGCTCCCTTGCTGGCTCCACTCGATACAAACCTCAGACTGGTGGAGACACAGCCGCCACAAAACCGGTTTCTCCAGCCACCTCATCAGAGGTGGCACAGCACAGTACAAAGTCAGAGTGCACAGAAGAGGACTTGGAAGATCTGATGAAAGATGATGAAGAACCAAATGAATTTGACACAACAGAAACAGTGGTAACAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCACTGACTCCTTTACAGCTAGTAGTAGCATTGATCGGTGGGCACTGGCCAATAATGCTACCACTGCCGCTGGTGGTAGCTGA 1089 0.4821 MSFPTYSILSFSHSKKKSAPFYFICPSLSTQGVHQTFSDLVFIFTVMEADWDLHAVVRSCTTTSSAATTISSTTSSSGFGASAPPSTSCSFFSAYNPAEQGDQVMSENPYEARPSIEELQELCKPFFLKPQPHTFQPSSPLSSFSYSSVPKSPSSQQEQKQPPHAGSASTPRTKRRKNQVKKVCEVAAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERKRSDPTMFIVTYTGEHNHPAPTHKSSLAGSTRYKPQTGGDTAATKPVSPATSSEVAQHSTKSECTEEDLEDLMKDDEEPNEFDTTETVVTDDFFEGLEELTGSATDSFTASSSIDRWALANNATTAAGGS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1086 362 MobiDBLite consensus disorder prediction 250 291 - -
Pvu10g1086 362 SUPERFAMILY WRKY DNA-binding domain 189 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g1086 362 MobiDBLite consensus disorder prediction 301 317 - -
Pvu10g1086 362 MobiDBLite consensus disorder prediction 245 320 - -
Pvu10g1086 362 Pfam WRKY DNA -binding domain 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g1086 362 ProSiteProfiles WRKY domain profile. 187 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g1086 362 MobiDBLite consensus disorder prediction 138 180 - -
Pvu10g1086 362 Gene3D WRKY domain 176 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g1086 362 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 47 361 - -
Pvu10g1086 362 MobiDBLite consensus disorder prediction 138 168 - -
Pvu10g1086 362 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 47 361 IPR044810 GO:0003700
Pvu10g1086 362 SMART WRKY_cls 192 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1086 Pvu-Chr10 36231937 36233733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1086 47 361 WRKY Transcription Factor Family AT4G01250 47.164 2.61e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu10g1086 WRKY 8.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1086 K13425 - gmx:100815829 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1086 10 36231937 36233733 Pvu4g1125 4 34620507 34622280 ECH
Pvu10g1086 10 36231937 36233733 Pvu7g0770 7 6907213 6908842 ECH
Pvu10g1086 10 36231937 36233733 Pvu10g1086 10 36231937 36233733 ECH
Pvu10g1086 10 36231937 36233733 Pvu8g0593 8 5181941 5183860 ECH
Pvu2g1648 2 30201373 30202358 Pvu10g1086 10 36231937 36233733 ECH
Pvu10g1512 10 41665877 41671047 Pvu10g1086 10 36231937 36233733 ECH
Pvu8g0593 8 5181941 5183860 Pvu10g1086 10 36231937 36233733 PCT