Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1075 ATGTCAGTGTACGACGCAGCTTTCGTCGACACGGAGCTTTCCAAACGGACTTCCATCTTCGGCCTCCGTCTCTGGGTCGTCATCGGCATCCTCGTCGGATCCCTCATCGTCATAGTCCTTTTTCTCCTGTCCCTCTGCCTCACCTCCCGCCGCCGCCACCACCACCACCACCACAAAACTCCCCTCCGCCGCAGCGCCGCCGCCGTCTCCACGCCGCCCATCTCCAAGGAAATTCTGGAGATCGTTCACGTTCCCATGCCGCCAGAAGCCGTCAACCTCCCGCCTCCGAAGGCGGAGCCCCGCGCCGCCGCCGTACTGTACTCCAGTGGGGAGAGTAGGGGAACTGGGAGCTTGTGCGAAACGGCGTCGTCACTGGGGAGCGGGAGTGTGGGCCCCGAAGTGTCGCATCTGGGGTGGGGGAGGTGGTACACGCTGAGGGAACTCGAAGCTGCGACTAATGGGTTGTGTGAAGAGAACGTGATTGGTGAAGGTGGCTATGGAATCGTGTATCGTGGGTTGTTACCTGATGGAAACAAGGTTGCTGTTAAGAACCTTTTGAATAATAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGTAATTGGTCGTGTGCGGCATAAGAATCTTGTAAGGTTGCTTGGATACTGTGTTGAGGGGGCGTACAGGATGCTCGTATATGAATATGTTGACAATGGGAATCTAGAACAGTGGCTGCACGGGGATGTTGGAACTGTAAGCCCTATAACTTGGGATATCCGAATGAACATTATACTGGGCACGGCAAAAGGACTGGCCTATCTTCATGAGGGTCTTGAACCCAAAGTTGTCCACCGAGACGTTAAATCGAGCAACATACTGCTTGATCGCCAATGGAACCCAAAGGTTTCTGATTTTGGGCTTGCGAAGCTTTTGTCTGCTGATCATAGTTATGTCACTACTCGAGTGATGGGCACCTTTGGTTATGTTGCACCTGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTGTATAGTTTTGGGATACTTATCATGGAAATAATTACGGGAAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTAATAGAGTGGCTGAAAAGTATGGTTGGGAATCGAAAATCTGAGGAAGTAGTTGATCCTAAGCTTGCTGAAAAGCCATCTTCAAGGGCTCTTAAACGGGTTCTTTTGGTTGCTCTTCGATGTGTCGACCCTGATGCTGCAAAGAGGCCTAAAATAGGACATGTTATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTGATGAACGAAGGACTGAGGGAGAATCTTCCCGTTCTCATCGTGATTATCAACTGGAGCATAAAGGGTCTGGATTAGATAAAAGGCAGACAGGTGGAGAGATCAACAATCAGATTGAAGATGACAGTACTAGTAGTAGTAGATATCACCATCAGCCTTCTAGATGGAGATAA 1473 0.4997 MSVYDAAFVDTELSKRTSIFGLRLWVVIGILVGSLIVIVLFLLSLCLTSRRRHHHHHHKTPLRRSAAAVSTPPISKEILEIVHVPMPPEAVNLPPPKAEPRAAAVLYSSGESRGTGSLCETASSLGSGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGLLPDGNKVAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGTVSPITWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLSADHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKSMVGNRKSEEVVDPKLAEKPSSRALKRVLLVALRCVDPDAAKRPKIGHVIHMLEAEDLLFRDERRTEGESSRSHRDYQLEHKGSGLDKRQTGGEINNQIEDDSTSSSRYHHQPSRWR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1075 490 Gene3D Transferase(Phosphotransferase) domain 1 231 442 - -
Pvu10g1075 490 MobiDBLite consensus disorder prediction 437 490 - -
Pvu10g1075 490 Gene3D Phosphorylase Kinase; domain 1 137 230 - -
Pvu10g1075 490 PANTHER BNACNNG08720D PROTEIN 1 451 - -
Pvu10g1075 490 SMART serkin_6 155 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1075 490 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524
Pvu10g1075 490 CDD STKc_IRAK 161 427 - -
Pvu10g1075 490 PANTHER OS01G0323000 PROTEIN 1 451 - -
Pvu10g1075 490 MobiDBLite consensus disorder prediction 437 461 - -
Pvu10g1075 490 SUPERFAMILY Protein kinase-like (PK-like) 133 427 IPR011009 -
Pvu10g1075 490 ProSiteProfiles Protein kinase domain profile. 155 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1075 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Pvu10g1075 490 Pfam Protein kinase domain 158 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1075 Pvu-Chr10 36030674 36034321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1075 26 427 Trihelix Transcription Factor Family AT5G38560 41.063 2.69e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pvu10g1075 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1075 - - gmx:100777348 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1136 6 22492533 22497265 Pvu10g1075 10 36030674 36034321 PCT
Pvu8g0604 8 5320279 5324065 Pvu10g1075 10 36030674 36034321 PCT