Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1051 ATGACTTCTCCATATACACCTCGCCGGCGATCCAGCTCCGACCCTAGCAGAACGCCGGGAAGAGTGCCCCCTTCTCCGGGATACGCCTCCTCCGAGCTCAGCACCTCCACAGTCTCAGCGCGCCAGAACCCCGTCTCCGCCGCCGCAAGGTTCTTCACCGGAATGTTCGCCGCGTGCATATCGCCGCCGGAATCCGACAATTCCAAGAGCATCGGGGATTCCGAGGAGTTTAAGTCTTCTTCCACTGCATCGAATGGTTCAAGAGCTGGTAGTAGGAGAGGGCGTGCCTCAAATGGAAGTATGAGCATCAGTTCATACAACATAGTACCAAAGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTACCAAGTCACAAGAAATTTCTCCCCTTCTTTCAAGATTGGGCAAGGTGGTTTTGGTGCTGTGTACAAGGCAAAACTCCTGGATGGGTCTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTCTATATGAGAAACATTTGGGGGTGGAGTTCCAGAGCGAGATCCAAACACTATCCCGGGTGGAACATTTGAACTTGGTCAAGTTTTATGGATATTTGGAGCAAGGGGATGAAAGGCTCATTGTCGTTGAGTATGTTCCAAATGGAACCCTCAGAGAACATTTAGATTGCATTCATGGAAGCGTTCTGGACCTTTCTGCACGTCTGGAAGTAGCAATTGATGTTTCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATAAAATCTTCGAACATTCTTCTCACTGAACATTTTCGAGCTAAAGTAGCAGACTTTGGTTTTGCTAGACAAGCCCCAGACAGTGACTCTGGCATGACTCATGTTTCCACCCAAGTCAAAGGAACAGCTGGCTACTTGGATCCTGAATACCTGAAAACTTATCAACTAACTGAAAAGAGTGATGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACCGGCAGACGCCCCATTGAACCAAAATTTGAACTCAAGGAGCGAATAACGGCAAAGTGGGCTATGAAGAGGTTCATGGATGAAGATGCTATCTCGGTCTTGGACCCAAGACTGGGTCAGACTTCTGCAAACACTTTGGCACTGCAAAAGATTCTGGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAACAGGCCTACTATGAAAAGATGTGCCGAGATCCTTTGGGCCATCCGCAAGGATTTCAGAGAGGAGTTATCAGCTTCAAACTTTCACTCATTTTCCACTACTTCCCAAAGGAGCACCTCACTGAGAGAGTGA 1314 0.4703 MTSPYTPRRRSSSDPSRTPGRVPPSPGYASSELSTSTVSARQNPVSAAARFFTGMFAACISPPESDNSKSIGDSEEFKSSSTASNGSRAGSRRGRASNGSMSISSYNIVPKKEPGIVKFTMEEIYQVTRNFSPSFKIGQGGFGAVYKAKLLDGSVVAVKRAKKSLYEKHLGVEFQSEIQTLSRVEHLNLVKFYGYLEQGDERLIVVEYVPNGTLREHLDCIHGSVLDLSARLEVAIDVSHAITYLHMYIDHPIIHRDIKSSNILLTEHFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFMDEDAISVLDPRLGQTSANTLALQKILELALQCLAPRRQNRPTMKRCAEILWAIRKDFREELSASNFHSFSTTSQRSTSLRE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1051 437 MobiDBLite consensus disorder prediction 63 103 - -
Pvu10g1051 437 CDD STKc_IRAK 137 406 - -
Pvu10g1051 437 SMART serkin_6 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1051 437 PANTHER RECEPTOR-LIKE PROTEIN 55 8 426 - -
Pvu10g1051 437 Gene3D Transferase(Phosphotransferase) domain 1 209 431 - -
Pvu10g1051 437 Gene3D Phosphorylase Kinase; domain 1 94 208 - -
Pvu10g1051 437 MobiDBLite consensus disorder prediction 1 40 - -
Pvu10g1051 437 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 8 426 - -
Pvu10g1051 437 ProSitePatterns Protein kinases ATP-binding region signature. 137 163 IPR017441 GO:0005524
Pvu10g1051 437 MobiDBLite consensus disorder prediction 1 18 - -
Pvu10g1051 437 Pfam Protein kinase domain 136 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1051 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Pvu10g1051 437 ProSiteProfiles Protein kinase domain profile. 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1051 437 SUPERFAMILY Protein kinase-like (PK-like) 106 409 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1051 Pvu-Chr10 35656695 35660501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1051 119 399 Receptor kinase-like Gene Family AT1G79620 46.127 1.19e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pvu10g1051 Pkinase 6.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1051 - - gmx:100792034 730.324