Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1048 ATGTTCCTCTCCTTTCTTTTCTTCATTCTCATTCTCAACACTTCCTCCTCCGCCACCATCATTCTCCAAGGCAACAACACTCTGCAAAGCCCCAACAACACTTTCCAACTTGGCTTCTTCAATTTCTTCCCAGGCCCGGGCCCGGGCCCGCCCAAATTCTACCTCGCCATCCGCCGCACTTCTTTACCCTACCCCAACACCGTCTGGGTGGCCAACCGCCTCCACCCCTCCGCCTCTCAAACCGCTTCATCCCTTAAACTAACCGCAACCGGTCAGCTACTCCTAACCCACTTCAACACCACTCTCTGGACCGCCGCCGCCGCCACCACCACCAACCTCACCCTCAGGCTTCTTGAATCCGGAAACCTCGTCCTCCTCACTTCTGACGGCGGCGTTTCATGGCAGAGTTTCGATTCCCCCTCTGACACGTGGCTCCCCGGCATGAACCTCACGCGCTTCAACTCCCTCGTCTCTTGGCGCACGGATACGGACCCTTCCCCGGGGCTTTACTCCCTGCGGTTGAAGCCGTCCTTCTACGGCGAGTTCGAGCTCGTCTTCAACGACACCGTTTCGTATTGGTCCACCGGGAACTGGAGCAATGGAATATTTGCCAACGTCCCCGAGATGACTGTCCCTTACATCTACGCCTTCCACTTCGCCGCGCCGTTCTCCCCCGCCGCGACCTTCGGCTTCTCCGAACGCGTCATCGCAACGGGCTTCGGGGCGCCGACGATGTTCCGCGTGGAGCCCTTCGGGCAGGTCAAGCAGTACTCGTGGAACAGCCAGTCGGGGTCCTGGGAGCACTTTTGGTCCAAGCCAGAGAGTCCGTGCCAGGTTCGGGGACTCTGCGGCGGGTTCGGGGTTTGCACTGGGGAAACATCCAAATTGTGTGAGTGTGTGAGTGGGTTTAAGCCATTGGATAATCATGGGTGGGGTTCTGGTGAATACTCTCAAGGTTGTCACCGTGTGGAGGCGGGGTGTGATACGGGTGATGGGTTTAAAGATCTTGGTGCTGTGAAGTTTGGATTTGGGAATGTGAGTCTGGTTAAGGGGAAATCTAGAAGCTCTTGCGAGCGCGAGTGTTTGGGTGATTGTGGGTGCGTTGGGTTGAGTTTCGACGAGCAGAGTGGGTTGTGCAAGAATTTTTATGGGTCGCTTTCGGATTTTCAGAATTTAACCGCCGATGGTGAGAGTGGGATTTTGTATGTTAGGGTTCCGGGAGGGGGATCTGGGAAGAAGGGGTTTGATTGGAAGGTTTTAAGTGGGGTTGTTATTGGGTCGGTGGCGGTTTTGGGGGTGGTGGTGGTGACATTGTTGGTGATGGTGAAGAGGAGGGGTGGAAGAAAGGGGTTGGAGGAGGAGGATGGGTTTGTGCCTGTGTTGAATTTGCGGGTGTTTTCTTACAAGGAACTTCAGTTGGCGACTCGGGGGTTCTCGGAGAAGATCGGGCATGGAGGGTTTGGGACTGTGTTTCAGGGGGAGTTGAGTGATGCTTCAATTGTGGCTGTAAAGAGGTTGGAGAGGCCAGGGAGTGGGGAGAAGGAGTTCAGGGCTGAGGTCTCCACAATTGGGAATATTCAACACGTAAATCTTGTGAGACTCAGAGGGTTTTGCTCTGAGAATTCCCATAGGCTTTTGGTTTATGAGTATATGCAGAATGGTGCTCTTAGTGTTTATTTGAGGAAGGAAGGGCCTAGTCTGAGTTGGGATGTTAGGTTTAGGGTGGCTGTTGGCACTGCTAAGGGGATTGCTTATTTACACGAGGAGTGTAGGTGTTGCATCATACATTGCGATATCAAGCCAGAGAACATTCTTTTGGATGCTGATTTCACTGCCAAGGTTTCTGATTTTGGGTTAGCAAAGCTCATTGGGAGGGACTTCAGTAGGGTGTTGGCGACTATGAGGGGAACGTGGGGGTATGTTGCACCGGAGTGGATTTCTGGTGTGGCAATTACAACCAAGGCAGATGTTTACAGCTATGGAATGACAATGCTGGAGCTGATTGGCGGTCGGAGGAACGTGGAGACACTGCCGTCTGCCAGCGGTGGTGGAGAGGGTGGTACTGAAAGTGGGGGGAAGTGGTTCTTCCCACCTTGGGCGGCGCAGCAGATAGTAGATGGAAATGTGGGTGAAGTGATTGATAAGAGACTTGGTGATGTGTATAACGTTGAGGAGGCTAGGAGGGTTGCTTTGGTGGCAGTTTGGTGCATTCAAGATGATGAGGCAATGAGACCTACTATGGGTATGGTGGTGAAGATGTTGGAGGGGTTGGTGGATGTGAGTGTTCCTCCACCTCCCCAGTTGCTTCAAGCTCTGGTTACTGGAGATTCCTTTCATGGGGTGAAGGCAAATTCAGGCAATGGTGTGTCTACTGGTGGAAGCTTATCTGATGGCAACTTGGAAGTGTCAACTGCTGATACTGAATCATATACAGGGAATGTTTTTTCTCCATTAGATGTGAATGTCAATGTCAGTGTGCGATAA 2484 0.527 MFLSFLFFILILNTSSSATIILQGNNTLQSPNNTFQLGFFNFFPGPGPGPPKFYLAIRRTSLPYPNTVWVANRLHPSASQTASSLKLTATGQLLLTHFNTTLWTAAAATTTNLTLRLLESGNLVLLTSDGGVSWQSFDSPSDTWLPGMNLTRFNSLVSWRTDTDPSPGLYSLRLKPSFYGEFELVFNDTVSYWSTGNWSNGIFANVPEMTVPYIYAFHFAAPFSPAATFGFSERVIATGFGAPTMFRVEPFGQVKQYSWNSQSGSWEHFWSKPESPCQVRGLCGGFGVCTGETSKLCECVSGFKPLDNHGWGSGEYSQGCHRVEAGCDTGDGFKDLGAVKFGFGNVSLVKGKSRSSCERECLGDCGCVGLSFDEQSGLCKNFYGSLSDFQNLTADGESGILYVRVPGGGSGKKGFDWKVLSGVVIGSVAVLGVVVVTLLVMVKRRGGRKGLEEEDGFVPVLNLRVFSYKELQLATRGFSEKIGHGGFGTVFQGELSDASIVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMQNGALSVYLRKEGPSLSWDVRFRVAVGTAKGIAYLHEECRCCIIHCDIKPENILLDADFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTMLELIGGRRNVETLPSASGGGEGGTESGGKWFFPPWAAQQIVDGNVGEVIDKRLGDVYNVEEARRVALVAVWCIQDDEAMRPTMGMVVKMLEGLVDVSVPPPPQLLQALVTGDSFHGVKANSGNGVSTGGSLSDGNLEVSTADTESYTGNVFSPLDVNVNVSVR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1048 827 PIRSF SRK 1 809 IPR024171 GO:0004674
Pvu10g1048 827 CDD STKc_IRAK 482 757 - -
Pvu10g1048 827 ProSitePatterns Protein kinases ATP-binding region signature. 482 504 IPR017441 GO:0005524
Pvu10g1048 827 CDD PAN_AP_plant 327 406 - -
Pvu10g1048 827 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 13 813 - -
Pvu10g1048 827 SUPERFAMILY Protein kinase-like (PK-like) 457 755 IPR011009 -
Pvu10g1048 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 53 198 IPR036426 -
Pvu10g1048 827 Pfam D-mannose binding lectin 67 152 IPR001480 -
Pvu10g1048 827 Gene3D Phosphorylase Kinase; domain 1 452 550 - -
Pvu10g1048 827 SMART serkin_6 476 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1048 827 Pfam S-locus glycoprotein domain 193 305 IPR000858 GO:0048544
Pvu10g1048 827 ProSiteProfiles PAN/Apple domain profile. 327 405 IPR003609 -
Pvu10g1048 827 ProSiteProfiles Bulb-type lectin domain profile. 13 138 IPR001480 -
Pvu10g1048 827 ProSiteProfiles Protein kinase domain profile. 476 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1048 827 Pfam Protein kinase domain 479 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1048 827 Gene3D Transferase(Phosphotransferase) domain 1 551 762 - -
Pvu10g1048 827 SMART blect_4 19 140 IPR001480 -
Pvu10g1048 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Pvu10g1048 827 Gene3D - 14 137 IPR036426 -
Pvu10g1048 827 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 13 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1048 Pvu-Chr10 35625762 35628245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1048 466 764 Receptor kinase-like Gene Family AT5G20050 47.115 1.69e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu10g1048 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1048 - - gmx:100778917 1285.01