Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1043 ATGGAAACTTCCACGGCTCTATTGTTTTTAACGGCGATCACAGCTTACTTGATATGGTTCACGTTCATCTCACGGTCGCTGAAGGGTCCACGTGTCTGGGCCTTGTTGGGCAGTCTCCCGGGCCTCATAGACAACTGTGACCGCATGCATGACTGGATCTGCGACAACCTACGCGCGTGTGGCGGCACGTACCAGACTTGCATCTGTGCAATCCCCTTCCTCGCCAAAAAGCAAGGTCTGGTGACTGTGACCTGCGACCCGAGGAACTTGGAGCACATACTGAAGACCCGCTTCGACAACTACCCCAAAGGCCCCACGTGGCATGCTGTCTTTCATGATCTTCTGGGTGATGGGATCTTCAATTCTGACGGTGACACATGGCTTTTCCAGCGCAAGACAGCAGCCCTGGAATTCACCACTAGGACATTGCGTCAAGCCATGGCTCGATGGGTGAGCCGAGCTATCAGCCGCCTCTGCTTGATCCTAAAGAAAGCTGAAGAAGAAGCTCAGCCCATTGATCTGCAAGACCTAATGCTTCGCCTCACTTTTGACAATATTTGTGGGTTAGCTTTTGGAAGAGACCCACAAACCTGTGTGTCAGGCTTGCCGGATAACCGTTTTGCAATGGCTTTTGACAGAGCCACCGAAGCCTCACTTCAAAGGTTCATTTTGCCTGAGGTGTTGTGGAAGGTGAAGAAATGGCTGAGGCTTGGAATGGAAGTGAGCTTGAGCAGAAGCCTTGTCCATGTGGACGACCATTTGTCAAATGTAATTGAGAAACGCAAGGTGGAGTTGCTGAATCTGCAGAAAGATGGGACTCTTCACGATGACTTGTTGACTAGGTTTATGAAGAAGAAAGAATCATACACAGACAAGTTTCTACAGCAGGTGGCTCTGAACTTTATCCTAGCTGGGCGTGACACGTCATCGGTGGCTCTGTGCTGGTTTTTCTGGTTGGTGATGCAGAATCCCAAAGTGGAGGAGAAAATTCTACGTGAAATTTGTACAGTCTTGATGGAGACGCGTGGCGATGACATTGCAAAGTGGTTGGATGAGCCATTGGCCTTTGAGGAGGTTGACCGTTTGGTTTATCTAAAGGCTGCATTGTCTGAGACACTGAGGTTGTACCCTTCTGTGCCGGAGGACTCAAAGCATGTGGTGGCCGATGACCTGCTGCCGGACGGCACGTTTGTGCCGGCGGGGTCGTCCGTGACGTATTCCATTTATTCAGCGGGGAGGATGAAGTCCACGTGGGGTGAGGATTGCATGGAGTTTAGACCTGAGAGGTGGTTGTCATTGGATGGGACGAAGTTCGTTATGCATGATTCTTTCAAGTTTGTGGCATTCAATGCTGGTCCAAGGATATGTTTGGGGAAGGATTTGGCTTACCTTCAGATGAAGTCGATTGCTGCCGCGGTGCTGCTCCGGCACCGCCTTGTGCTGGTGCCTGGCCACCAGGTGGAGCAAAAGATGTCACTCACTTTGTTCATGAAAAATGGACTCAAGGTCAATGTGCATGAGAGGGACTTGAGAGGGGTCGTTATAAGTATACAAAAAGAAAAAGAGGGAGATGCTGGTTTTAGAAGTAATGAAAGTTAG 1599 0.5003 METSTALLFLTAITAYLIWFTFISRSLKGPRVWALLGSLPGLIDNCDRMHDWICDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAISRLCLILKKAEEEAQPIDLQDLMLRLTFDNICGLAFGRDPQTCVSGLPDNRFAMAFDRATEASLQRFILPEVLWKVKKWLRLGMEVSLSRSLVHVDDHLSNVIEKRKVELLNLQKDGTLHDDLLTRFMKKKESYTDKFLQQVALNFILAGRDTSSVALCWFFWLVMQNPKVEEKILREICTVLMETRGDDIAKWLDEPLAFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVADDLLPDGTFVPAGSSVTYSIYSAGRMKSTWGEDCMEFRPERWLSLDGTKFVMHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLVLVPGHQVEQKMSLTLFMKNGLKVNVHERDLRGVVISIQKEKEGDAGFRSNES* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1043 532 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PANTHER CYTOCHROME P450 3 510 - -
Pvu10g1043 532 PANTHER CYTOCHROME P450 86A7 3 510 - -
Pvu10g1043 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Pvu10g1043 532 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g1043 532 Pfam Cytochrome P450 81 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1043 Pvu-Chr10 35524025 35525623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1043 1 523 Cytochrome P450 AT2G45970 77.905 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1043 K15398 - gmx:100779986 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1043 10 35524025 35525623 Pvu10g1043 10 35524025 35525623 ECH