Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1037 ATGGCAGTGATGAGTTCTATGCCTGCAACTCCACCACAGGTCAATCCTAAGAACAAGCTTCGTGATATTGGGGTTCCTGGAATCACAGCTAGTAGGAGAGAAATTGTAAGTGAGCCTAGTCCAAGTATGGTTAATGATACAGTCTATGTTGCTGTGGCAAAAGATGTGAAAGACAGCAAATTAAATCTCATATGGGCAATACAAAATTCTGGAGGAAGGAGAATTTGCATCCTTCATGTTCACGTGCCAGCACCTATGATCCCTTTGATGGGTGCAAAATTTCCTGCAAGTGCGCTGAGAGAGCAGGAAGTTCAAGATTATCATGAGAGGGAAAGGCAAAACATTCAGAAGACTATGGATGCCTATCTTTATATCTGTCAAAAAATGGGGGTGCGGGCAGGGAAACTACACATTGAAATGGATAGTGTAGAAAAAGGGATTGTAGAACTCATCCACCAGTATGGCATACAGAGGCTTGTAATGGGAGCAGCATCTGATAAGTACCATTCTAGGAGAATGATATCCCTCAAATCTAAGAAAGCTATATATGTATGTGAACAAGCTCCAGCTTCATGTCATATACAGTTTATCTGCAACGGGTACCTCATACACACAAGGGATTGCAGATTGGATAGAGGGAATGTAGAGGTCGTATCTCCTTCTGTGCAGCGAATAGCAAACTCTGAAGTTGGGCATTCACCTAACATGGGGTCGCCATCCACAGTGCAAGCGCAAAATCGTTGGAGAAAACTAAGTAATCCCGGAAAAGAGTTATTTCGTAGAGTTAGGACTATCAGTGATGGAGATGGGAGGAGCATTGGATCTGTTTCTTCTTTAGAAGGGTTCTTAACTCCTCAGAGAAAGTTCGGTAAAGAAGCAAGTTGTGATGAGGTAGGTGGGCAGTCACGGCGGAGTCCTTCAGTATTCTCAATGTGCTGTGAGAGTTGTTCGGTTGATCCATATTTTATTAACAATGGCAGTGAGAATGTAGAATTGTCATTGAATGACTTTTCTATGAATAACAAGGATCTTCATCATTCACCATCTCCAAGTGTACTGGATGGAGGAATGGATGATGCTCTCTATGCTCAACTTGAACAGGCAATGGCTGAGGTTGCGAATGCTAAGCATGATGCATATCAAGAAACTTTTAAGCGTGTGAAAGCAGAAAGAGATTCCATTGATGCTATACGCAACGCTAAAGCCATTGAAAATTTGTATCAAGAAGAACTAAAACTAAGAAAAGAACAAGAGGAAGAAGTACAGAAAGCAAATGAAGAACTTGAGGATATGAAGAGGCAGATAAACAAAGTTAATGAGGAACTCCAAGTCGCCTTAGATCAGAAAATATCTCTAGAGAATCGAATTGCATCAACTGAACTTATTATAAAGGAGTTGGAGAAGAGGAATATATCTGCTGCTGAGCTGTCTCAAAAGTACAAGAATGAAGTAGATGATTTGCAAATGCAGCGTGATAATGCATTGGGAGAGGCCGAGGAGTTAAGGAGAACACAAGGGGAAGCCTCAAGCACGCACGGGCTTCAACCCTTCTCAGAATTCTCCTTTTCAGAGATTAAAGAAGCAACAAGAAACTTCAATCCATCCCTCAAGATTGGACAAGGAGGATATGGAAGTATATTTAGAGGTATCTTACGTCACACTGAGGTGGCTATAAAAATGTTGAGTCCTGATAGCACCCAAGGTCCAGTGGAGTTTCAGCAAGAGGTAGAAGTATTGAGCAACTTAAGGCACCCCAACCTTGTGACACTTATAGGGTCCTGCCCAGAATCCTGGACTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAAGATCGTCTAAACTGCAAGGATAACACACCTCCATTATCATGGCAAACTAGAATTCGCGTTGCTGCAGAACTCTGCTCGGCTGTCATCTTTCTTCACTCAAGTAAACCTCACAGCATAGCACATGGTGATTTAAAACCAGGCAACATTCTCCTTGATGCAAACTTTGTAAGCAAGCTCGGAGACTTTGGAATCTGTCGTATATTATCTTGTCAAGAGGGTTCAAGTAGCAGCACTACACAGTTTTGGAGAACT 2085 0.4206 MAVMSSMPATPPQVNPKNKLRDIGVPGITASRREIVSEPSPSMVNDTVYVAVAKDVKDSKLNLIWAIQNSGGRRICILHVHVPAPMIPLMGAKFPASALREQEVQDYHERERQNIQKTMDAYLYICQKMGVRAGKLHIEMDSVEKGIVELIHQYGIQRLVMGAASDKYHSRRMISLKSKKAIYVCEQAPASCHIQFICNGYLIHTRDCRLDRGNVEVVSPSVQRIANSEVGHSPNMGSPSTVQAQNRWRKLSNPGKELFRRVRTISDGDGRSIGSVSSLEGFLTPQRKFGKEASCDEVGGQSRRSPSVFSMCCESCSVDPYFINNGSENVELSLNDFSMNNKDLHHSPSPSVLDGGMDDALYAQLEQAMAEVANAKHDAYQETFKRVKAERDSIDAIRNAKAIENLYQEELKLRKEQEEEVQKANEELEDMKRQINKVNEELQVALDQKISLENRIASTELIIKELEKRNISAAELSQKYKNEVDDLQMQRDNALGEAEELRRTQGEASSTHGLQPFSEFSFSEIKEATRNFNPSLKIGQGGYGSIFRGILRHTEVAIKMLSPDSTQGPVEFQQEVEVLSNLRHPNLVTLIGSCPESWTLVYEYLPNGSLEDRLNCKDNTPPLSWQTRIRVAAELCSAVIFLHSSKPHSIAHGDLKPGNILLDANFVSKLGDFGICRILSCQEGSSSSTTQFWRT 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1037 695 CDD STK_N 47 200 - -
Pvu10g1037 695 Pfam Protein kinase domain 536 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1037 695 Gene3D Transferase(Phosphotransferase) domain 1 605 695 - -
Pvu10g1037 695 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 59 171 - -
Pvu10g1037 695 SUPERFAMILY Protein kinase-like (PK-like) 509 686 IPR011009 -
Pvu10g1037 695 Gene3D Phosphorylase Kinase; domain 1 503 604 - -
Pvu10g1037 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Pvu10g1037 695 PANTHER U-BOX KINASE FAMILY PROTEIN 15 695 - -
Pvu10g1037 695 SMART serkin_6 532 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1037 695 MobiDBLite consensus disorder prediction 1 23 - -
Pvu10g1037 695 ProSitePatterns Protein kinases ATP-binding region signature. 538 559 IPR017441 GO:0005524
Pvu10g1037 695 Coils Coil 362 390 - -
Pvu10g1037 695 PANTHER OS02G0152300 PROTEIN 15 695 - -
Pvu10g1037 695 Gene3D HUPs 48 194 IPR014729 -
Pvu10g1037 695 ProSiteProfiles Protein kinase domain profile. 532 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1037 695 Coils Coil 399 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1037 Pvu-Chr10 35339508 35344731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1037 356 679 U-box Gene Family AT2G45910 55.556 5.98e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu10g1037 Pkinase 6.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1037 - - pvu:PHAVU_010G0994001 1373.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0632 8 5642855 5650476 Pvu10g1037 10 35339508 35344731 PCT