Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1027 ATGAAATTTCAGAGAACTAGAATGGCCAAAAAGGGGAATCCAAAGCATGAGAAGATGCAGAAGAACCTATGCACCCAGCTTGCAGTTGCAGTCAGAAGCATTCAGTGGAGCTATGGGATTTTCTGGGCACCTTCAACAACTGAAGAAAGGGTACTGGAATGGAGAGAAGGGTACTATAATGGAGACATTAAGACAAGAAAGACAGTTCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGCCTGCAGAGGAGTGAGCAACTGAAGGAACTATACAAGTTTCTTCTTGCAGGAGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGACCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTATCTTCAGTCAAAATCAAAGTTTGCCTGGAAGAGCACAGGAAGTTGGTGACACAATCTGGTTATGTGATGCTCAGCATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAATTCAGACTGTGGTGTGCTTTCCCTATCAGAAAGGCGTTATTGAGATAGGCTCAACTGAAATGGTTATCGAGGACCCTAGTCTCATTCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGCTCAGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAGGGTGACCACAGGGTGTTAGATGCAATGGTTTTGGAGAATCCATGTTCCCTTGAAAAAAATATCAAATTTGATAATCATGATCCTATCAATGAATTAGAAGGTGACAACAATGAAGATTCTGACATGGATTCTCCTGATGGTGTTGAACACCATTACCCTATGAGATCCATGATCGATGGTATGAATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGTATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTATAAACCAAAGAGAAGCTTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATTAGAACACTTTGTTCTATTTTGGGGACCTCATCAACATTTAAAGCAAACCCTTATGCCTGTAACTCGAATTGCAAATCTAGTTTTTCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGGCAAGGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGCAATGGACTAGTAAATTTGATAATGCTGATGATGGTTTCATGGGGAAAGCATTCTCTGATAAGAAAGGAGAAATTAAAAACTTTCAGGTTGTCAAATCTTTGGTTCCATCTTCTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGTGACACAATCAAGTACTTGAAAAGGCTTGAGACAAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATACTGAAGCAAGAACCAGGAGAAAATGCCCTGATGTTCTAGAACAGATGTCTGATAACTATGGCACAAGAAAGATTTGCATGGCAGTGAAACCTTGGATGAACAGGAGGAAGGCTAGTGGTATTGATGAAATAGACACAGAACTAGAAAGAATTGTTTCTGAAGAAGCAAAGGCATTGGATGTGAAAGTGAAGGTAAAGGAGCAAGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTCTATGATATCATGGATACCATTAACAATCTCCATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGTGTTCTCTCATTGACACTAAAATCTAAGTTTCGAGGAGCAGCAACAGCACCAATGAGGATGATCAAAGAAGCACTCTGGAAAGCATATGGAAATATTTGA 1974 0.4048 MKFQRTRMAKKGNPKHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFIFSQNQSLPGRAQEVGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTEMVIEDPSLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDHRVLDAMVLENPCSLEKNIKFDNHDPINELEGDNNEDSDMDSPDGVEHHYPMRSMIDGMNGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYKPKRSFLDAGADEDLCYIRTLCSILGTSSTFKANPYACNSNCKSSFSKWKKGRVSERKRARFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMQWTSKFDNADDGFMGKAFSDKKGEIKNFQVVKSLVPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADTEARTRRKCPDVLEQMSDNYGTRKICMAVKPWMNRRKASGIDEIDTELERIVSEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPMRMIKEALWKAYGNI* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1027 657 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 208 IPR025610 -
Pvu10g1027 657 PANTHER TRANSCRIPTION FACTOR TT8 15 654 - -
Pvu10g1027 657 PANTHER TRANSCRIPTION FACTOR MYC1 15 654 - -
Pvu10g1027 657 Coils Coil 500 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1027 Pvu-Chr10 35230997 35235836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1027 22 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 38.675 1.24e-118 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1027 - - gmx:100783746 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1027 10 35230997 35235836 Pvu10g1027 10 35230997 35235836 ECH