Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0978 ATGCCTCGTGGAACGCTTGAAGTTATTTTGATCAGCGCCAAAGGCATCGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAGGACACAGGAGCACAAGAGCACTGTGCAAAAAGATTCTGGATCCAAACCTCAATGGAATGAGAACTTTCTTTTCACTGTCTCTGACAGTACTTCTGAACTTAATCTAAAGATCATGGATAAAGACAACTTTACTCAAGATGATTTTCTTGGCGAGGCAACCATTGATTTAGGTCCACTGTTTGAAGCTGGTAGCCTTCCAGAAACTGTTCACAAGGTTGTGAAGGACGAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTCACTGCTGAGAGAAACGAGGAATATAGTGTAGAGGATGACAACTATGGTGGATGGAAAGAATCAAATGAGGAATTCTAG 444 0.4122 MPRGTLEVILISAKGIDDNDFLSSIDPYVILTYRTQEHKSTVQKDSGSKPQWNENFLFTVSDSTSELNLKIMDKDNFTQDDFLGEATIDLGPLFEAGSLPETVHKVVKDEEYCGEIKVALTFTAERNEEYSVEDDNYGGWKESNEEF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0978 147 Pfam C2 domain 4 96 IPR000008 -
Pvu10g0978 147 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 147 - -
Pvu10g0978 147 PANTHER C2 DOMAIN-CONTAINING 1 147 - -
Pvu10g0978 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Pvu10g0978 147 SMART C2_3c 5 102 IPR000008 -
Pvu10g0978 147 Gene3D C2 domain 2 124 IPR035892 -
Pvu10g0978 147 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0978 Pvu-Chr10 34558766 34561242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0978 4 97 C2H2 Transcription Factor Family AT4G21160 38.298 1.89e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0978 - - gmx:100500006 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0978 10 34558766 34561242 Pvu10g0978 10 34558766 34561242 ECH