Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0973 ATGAGCGAGAACAATAACTTATCCCTCGATGACATTCCAATCGTTGAAGGTGAGGTGTCAGCTGTTGGTCATGACACAGTTTTGGACAATGTTGAACCCTCTGTTCCTACCGTTGGAATGTGTTTTGGCAGTGCTCCTACGGTTGGAATGTGTTTTGACAGTGCAAAAGCTGTGAAGACTTACTACAGACAATATGCAATTACAAAGGGATTTGGCATTAGGATTAGAAGTTCAAAGAAAGGGGTGGACAATGAAATTAGGTACTTCATGTTGGTATGTTCAAGAGAAGGAAAATATGTCTCCCCTATCCCTACAGAAATCAAGACCCTTCCCACCCAAGCCAATGAATGTCAGGCTCGTATTACTGTTGGAAGAAAGGAGGGCAAATGGTATATAATGTCTGTCATTGACGAACACTCTCATGATCTCAGCCCGACAAAGTCAAGGTTATTTTGTGGTAATAGGAAACTAAAATTGAAAAGGAATCTTGAGAAGAATGACGATGTAGGAGTGAGGATCAACAAAAGTTTTCAATCATTGGCTAGCGTTGCAGGAGGTTATGATAGCCAAGGATTTGTTGAAGGAGATGTTCGAAAGTATGTTGGTAAACAACGACATGCCTTGGGTAAGGATGGTGATGGTAAAGCACTATTGAGCCATTTTTTACGCATGCGAGAATTGAATAAGGATTTTTTCTTCGACATTGACATAGATGATGAAAACCGCATAAGAAATTTTTTCTGGGCAGATGCAAGAAGTCGGGCAGCATGTTATGATTTTGGGGACATTGTATCATTTGATACCACATACCTAATCAACAAATATGACATGCCTTTCACACCGTTTCTTGGTGTAAACCATCATGGACAATATATTTTGTTAGGTTGTGCACTCTTGTCTTCAGAAGACACCAACACATTTGTATGGTTGTTTGAGTGTTGGCTTCGATGTATGTCGTACAAGGCCCCACAAGGCATTGTGACAGACCAATGTAAAGCAATTAAAAACGCCATTTCAGTTGTCTTCCCTCAAACACATCATAGGTGGTGTCTATGGCACATCATGAAAAAGATCCCTGAAAAATTGCAAGGCTATGGTGAATACAAGGAGATCAAACATGCAATGAAGGTTGTGGTTTATGAGACGATGATTGTTGATGAATTTGAATGTGAATGGGGAAAATTTATAAACACATTTGGATTGATGAACGATGAATGGTTGGGAACCCTTTATGATGAACGTCATAGATGGGTACCTTGTTATTTGAAAAATAATTTTTGGGCTGGAATGTCAACAACCCAAAGAAGTAAGAGCATGAATGCTTTTTTTGACGGGTACATCAATTCAACCACTACCCTGCAGCAATTTCTACTTCAGTATGACAATGCATTGCAACACAAGGCTGAGAAGGAGTATGAGGCTGACTTTGCATCCTTAAACACAGTCATTCCATGCGGATCTCAGTCCCTCATAGAAAGACAATTCCAGACAGAGTATACCCATGCAAAATTTGGTGAAGTTCAAACAGAATTCAGGGGTAAAATGAATTGTGTGGTGCAGAATGTCGTGGTCAATGGAGATGTTTGCAGATACGATGTCATGGAGGAGTTCATACACAATGGGCATAGCCGTGATAGATTGTACATTGTATGTTATGATCGTGACAACCACAATGTGAACTGTAATTGTTTGTTGTTTGAGTTTAAGGGGATTTTGTGCAGACATTGTTTGGTTGTGCTGGCACAAGAGAGACAGAAACAGGTTCCTGCAAAGTATGTGTTGATTAGGTGGAGCAAAAACGTCCGGAGAAAACATACTTACATCAAAGCATCTTATAACATAACAGATAAAGAACCTCATATTAAACGTTATGATGCACTGTGCAAGAAATTTTCTGAAATTGCACAGGTGGCATGTGAAAAACCTGAGACAACTGAATTATTGTTTCAGCATCTGCATACCTTTTCCACTCTTCATGCCCTCCCTGGCCCCACAACAACACAGCACATCAATGGTGGGCAGTTAGATATAAATGCTTTAGACAGCACACCCCAGTCCAATGATGCGTCCAATCTCACTGTCTACCCAGAAATTCGTAGCCTAGTTGCAGTTCAAAGAAAGGGACAACCCCGCTCATGA 2139 0.4044 MSENNNLSLDDIPIVEGEVSAVGHDTVLDNVEPSVPTVGMCFGSAPTVGMCFDSAKAVKTYYRQYAITKGFGIRIRSSKKGVDNEIRYFMLVCSREGKYVSPIPTEIKTLPTQANECQARITVGRKEGKWYIMSVIDEHSHDLSPTKSRLFCGNRKLKLKRNLEKNDDVGVRINKSFQSLASVAGGYDSQGFVEGDVRKYVGKQRHALGKDGDGKALLSHFLRMRELNKDFFFDIDIDDENRIRNFFWADARSRAACYDFGDIVSFDTTYLINKYDMPFTPFLGVNHHGQYILLGCALLSSEDTNTFVWLFECWLRCMSYKAPQGIVTDQCKAIKNAISVVFPQTHHRWCLWHIMKKIPEKLQGYGEYKEIKHAMKVVVYETMIVDEFECEWGKFINTFGLMNDEWLGTLYDERHRWVPCYLKNNFWAGMSTTQRSKSMNAFFDGYINSTTTLQQFLLQYDNALQHKAEKEYEADFASLNTVIPCGSQSLIERQFQTEYTHAKFGEVQTEFRGKMNCVVQNVVVNGDVCRYDVMEEFIHNGHSRDRLYIVCYDRDNHNVNCNCLLFEFKGILCRHCLVVLAQERQKQVPAKYVLIRWSKNVRRKHTYIKASYNITDKEPHIKRYDALCKKFSEIAQVACEKPETTELLFQHLHTFSTLHALPGPTTTQHINGGQLDINALDSTPQSNDASNLTVYPEIRSLVAVQRKGQPRS* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0973 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 617 IPR031052 GO:0006355
Pvu10g0973 712 Pfam MULE transposase domain 263 357 IPR018289 -
Pvu10g0973 712 Pfam FAR1 DNA-binding domain 60 144 IPR004330 -
Pvu10g0973 712 PANTHER OS03G0843700 PROTEIN 42 617 - -
Pvu10g0973 712 Pfam SWIM zinc finger 560 580 IPR007527 GO:0008270
Pvu10g0973 712 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Pvu10g0973 712 SMART 26again6 559 586 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0973 Pvu-Chr10 34407596 34417172 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu10g0973 MULE 2.1e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0973 - - var:108332824 848.195