Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0941 ATGAGTTTTGGGGGTTTTCTTGAAAACAAATCAGGTAGTGGCAGTGCCAGAAACGACGTTTCGGATATTCCTTACAACGACGTTACCACCACCAACCATACCAACAACAACAACGACGATAGAATGCCCTTTGGTGCAATCTCTCAGCCCCGCCTCGTGACCACCACTCCCACCTTGGCCAAATCCATGTTCAACTCTCCAGGACTATCTCTGGCACTTCAAACTAATATAGACGGACAGGAAGATGTGAATAGAATGGTGGAGAATAGCTTCGAACCAAATGGTTTGCGAAGAAGCAGAGAAGAAGAACATGAAAGCAGATCTGGCAGCGACAACATCGACGGCGCTTCCGGCGATGAACAAGACGCCGCCGACAACCCTCCGAGGAAAAAACGCTATCACCGACACACACCTCAGCAGATACAAGAACTTGAAGCATTTTTCAAGGAGTGTCCTCATCCAGACGAGAAGCAAAGGCTCGAACTTAGCAAGAGGCTGTCCTTGGAAACTCGACAGGTGAAGTTTTGGTTCCAAAACCGTAGAACCCAAATGAAGACCCAGTTGGAGCGGCACGAGAACACTTTGCTGAGGCAAGAGAACGACAAGCTGAGAGCGGAGAACATGTCTATCAGGGATGCAATGAGGAACCCCATGTGCTCCAATTGCGGTGGCCCTGCCATCATCGGCGAGATTTCGCTGGAGGAGCAGCACCTTCGGATTGAGAATGCCCGGTTGAAGGACGAGCTCGATCGCGTGTGTGCACTCACGGGCAAGTTTCTGGGTCGCCCCGTTTCTTCGTTACCGAATTCAAGTTTGGAGCTTGGCGTTGGGGGGAACGGGTTTGGTGGAATCAGCATGAGCACTACAATGCCTTTGGGACAAGATTTTGGAATGGGAATGTCTATGTCTGTGTCTAACAACCCTTTGGCTATGGTGTCTCCCTCGAGTACTAGACCAACTTCTGTTGTGGGTGGGTTTGATAGGTCCATCGAGAGGTCCATGTTTCTTGAGCTCGCTTTGGCTGCCATGGATGAGTTGGTGAAGATGGCTCAAGCTGGGGAGCCTCTTTGGGTAAGGAATGTTGAAGGTGGGAGGGAAATTATGAACCATGAGGAGTACGTCAGGACTTTCACTCCTTGTATTGGTTTGAGACCCAATGGGTTTGTGTCTGACGCATCTAGGGAAAATGGGATGGTCATCATTAACAGTTTGGCTCTTGTCGAGACTCTCATGGACGCGAATCGATGGGCAGAGATGTTTCCTTGTATCATTGCGAGAACCTCCACTGCTGAAGTGATATCTAATGGAATAAATGGAACAAGAAATGGAGCACTTCAATTAATGCATGCTGAACTTCAAGTTCTTTCGCCTTTGGTTCCTGTTCGTGAGGTCAATTTCCTAAGGTTTTGCAAGCAGCACGCAGAAGGGGTTTGGGCAGTGGTGGATGTGTCCATTGATAGCATCAGAGAAAGTTCAGGAGCACCACCCAGTTTTGTCAACTGTAGGAGGCTTCCTTCTGGTTGTGTTGTGCAAGACATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGATGAGAGCCAAGTTCACCAGGTTTATAGACCATTGTTAAGCTCAGGAATGGGGTTCGGTGCTCAACGTTGGGTGGCTACCCTTCAACGCCAATGCGAGTGTCTTGCGATCCTAATGTCCTCAGCAGCACCCTCTAGAGACCATTCAGCAATAACGGCGGGGGGAAGGCGGAGCATGGTGAAGCTGGCGCAGCGAATGACCAACAACTTCTGCGCCGGTGTGTGTGCCTCCACGGTGCACAAGTGGAACAAGCTCAACCCTGGGAACGTGGATGAGGACGTGAGGGTGATGACGCGGAAGAGCGTGGATGATCCCGGCGAGCCGCCGGGGATTGTGCTGAGTGCCGCCACCTCCGTGTGGCTCCCTGTGTCGCCCCAGAGGCTCTTCGACTTCCTCCGCGACGAGCGCCTGCGAAGCGAGTGGGACATACTCTCCAACGGTGGGCCCATGCAAGAGATGGCCCATATTGCCAAGGGCCAAGACCACGGCAACTGCGTCTCTCTCCTGCGAGCTAGTGCCATAAACTCGAACCAGAGTAGCATGCTGATACTACAGGAGACATGCATAGACGAGGCGGGGTCACTTGTGGTGTACGCGCCGGTGGATATCCCGGCCATGCACGTGGTAATGAACGGTGGTGATTCGGCTTACGTGGCATTGCTACCTTCAGGGTTTGCTATTGTTCCAGATGGGCCCGGGTCTCGTGGGTCACAGAATGGCACTACTACCACAGCAAATGGTGGTGATAATGGTGGGGCGCGTGTGAGTGGGTCCCTCTTAACGGTGGCGTTTCAGATCCTTGTGAATAGTCTTCCTACAGCCAAGCTCACAGTAGAGTCCGTGGAAACCGTGAACAACCTCATATCATGCACCGTTCAAAAGATCAAAGCTGCCCTGCACTGCGAAAGTTAA 2496 0.518 MSFGGFLENKSGSGSARNDVSDIPYNDVTTTNHTNNNNDDRMPFGAISQPRLVTTTPTLAKSMFNSPGLSLALQTNIDGQEDVNRMVENSFEPNGLRRSREEEHESRSGSDNIDGASGDEQDAADNPPRKKRYHRHTPQQIQELEAFFKECPHPDEKQRLELSKRLSLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALTGKFLGRPVSSLPNSSLELGVGGNGFGGISMSTTMPLGQDFGMGMSMSVSNNPLAMVSPSSTRPTSVVGGFDRSIERSMFLELALAAMDELVKMAQAGEPLWVRNVEGGREIMNHEEYVRTFTPCIGLRPNGFVSDASRENGMVIINSLALVETLMDANRWAEMFPCIIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPPSFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQVYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMVKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQNGTTTTANGGDNGGARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0941 831 Coils Coil 181 213 - -
Pvu10g0941 831 Pfam START domain 337 562 IPR002913 GO:0008289
Pvu10g0941 831 SUPERFAMILY Bet v1-like 589 824 - -
Pvu10g0941 831 MobiDBLite consensus disorder prediction 90 137 - -
Pvu10g0941 831 CDD START_ArGLABRA2_like 332 561 - -
Pvu10g0941 831 ProSiteProfiles START domain profile. 328 565 IPR002913 GO:0008289
Pvu10g0941 831 Gene3D - 405 559 IPR023393 -
Pvu10g0941 831 ProSiteProfiles 'Homeobox' domain profile. 127 187 IPR001356 GO:0003677
Pvu10g0941 831 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 74 828 - -
Pvu10g0941 831 SMART START_1 337 562 IPR002913 GO:0008289
Pvu10g0941 831 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 74 828 IPR042160 -
Pvu10g0941 831 ProSitePatterns 'Homeobox' domain signature. 162 185 IPR017970 GO:0000981|GO:0006355
Pvu10g0941 831 SUPERFAMILY Homeodomain-like 116 187 IPR009057 -
Pvu10g0941 831 Gene3D - 116 203 - -
Pvu10g0941 831 Pfam Homeodomain 130 185 IPR001356 GO:0003677
Pvu10g0941 831 MobiDBLite consensus disorder prediction 1 46 - -
Pvu10g0941 831 MobiDBLite consensus disorder prediction 762 778 - -
Pvu10g0941 831 CDD homeodomain 129 187 IPR001356 GO:0003677
Pvu10g0941 831 MobiDBLite consensus disorder prediction 759 778 - -
Pvu10g0941 831 MobiDBLite consensus disorder prediction 94 110 - -
Pvu10g0941 831 SUPERFAMILY Bet v1-like 330 562 - -
Pvu10g0941 831 SMART HOX_1 128 191 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0941 Pvu-Chr10 33488656 33495230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0941 1 831 Homeobox Transcription Factor Family AT3G61150 65.398 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pvu10g0941 START 1.7e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0941 K09338 - gmx:100811873 1478.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0737 8 6744457 6750834 Pvu10g0941 10 33488656 33495230 PCT