Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0940 ATGAATATGATGCGAAGGTTGAAGAGCATTGCTTCTGGGAGGACTTCCATTTCTTCAGATCCTGGAGGGGATTCTAACTCGAAAAGAGCCAAGTTTGAACAAGAAACTGAAGTGAAGGCTGTTGAGAAAACAAATATTGTTGAGAAAGTAAGCACAGATCAGGATCAGCCTGTAGATGCACTCAAAGAAACTACAGTTGGCACATCTGATGTGTCTACAGCAGCTAGAACTGAGAAGTCCGGCTATGACGAACTTCCAAAAGAGTTAAATGAAATGAAAATTAGAGATGAGAAAAGCAAGAACAACAATGAAAAGGATATGGAAGCAACTGTTGTGAGTGGTAATGGAACAGAAACAGGTCAAATAATAACAACTGCCATTGGTGGTCGGGATGGACAACCAAAACAGACAATCTCATACATGGCTGAACGTGTGGTTGGAACTGGTTCTTTTGGTGTCGTTTTTCAGGCTAAGTGCCTTGAGACTGGTGAAGCAGTTGCCATAAAGAAAGTGCTGCAAGACAAGAGATATAAGAATAGGGAACTCCAGGTTATGCGCACAGTTGACCATCCAAACGTTGTTAAACTAAAGCACTGCTTCTTTTCAACCACTGATAAAGATGAATTATACCTTAACCTGGTTTTGGAGTATGTACCTGAAACTGTCTATAAAGTTTCAAAGCACTATGTTAGGATGCACCAACATATGCCCATGATTTACGTGCAACTGTATACATACCAGATATGCCGTGCATTGAATTATTTACATCAAGTTATTGGTGTCTGTCACCGTGACATCAAACCCCAGAATCTACTGGTAAATCCGCAGACACATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCCAACATATCATACATTTGCTCTCGATATTATAGAGCTCCAGAACTTATATTTGGGGCAACTGAATACACAACAGCCATTGATATGTGGTCTGTTGGTTGTGTTTTAGCTGAGCTACTTCTAGGACAGCCATTGTTTCCTGGTGAGAGTGGGGTTGATCAGTTAGTAGAGATAATAAAGATCTTGGGAACTCCAACCAGAGAAGAAATAAGGTGCATGAATCCCAACTACAATGAATTTAAGTTTCCTCAGATTAAAGCTCACCCATGGCACAAGGTTTTTCACAAGAGAATGCCACCTGAAGCTGTGGATCTGGTGTCAAGGCTTCTTCAATATTCTCCAAATCTACGTTGCACTGCTTTGGCTGCATGTGCACATCCATTTTTTGACGATCTGCGGGATCCAAATGCATGCTTGCCAAATGGGCGACCCCTACCTCCTTTGTTCAACTTCACATCTCAAGAACTGGCAAATGCACCTGAAGAGTTGTGTGGCCGCCTCATTCCTGAACATGCAAGGAGTTGA 1410 0.4184 MNMMRRLKSIASGRTSISSDPGGDSNSKRAKFEQETEVKAVEKTNIVEKVSTDQDQPVDALKETTVGTSDVSTAARTEKSGYDELPKELNEMKIRDEKSKNNNEKDMEATVVSGNGTETGQIITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQVMRTVDHPNVVKLKHCFFSTTDKDELYLNLVLEYVPETVYKVSKHYVRMHQHMPMIYVQLYTYQICRALNYLHQVIGVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIRCMNPNYNEFKFPQIKAHPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTALAACAHPFFDDLRDPNACLPNGRPLPPLFNFTSQELANAPEELCGRLIPEHARS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0940 469 PANTHER SHAGGY-LIKE KINASE 6 469 - -
Pvu10g0940 469 SUPERFAMILY Protein kinase-like (PK-like) 139 450 IPR011009 -
Pvu10g0940 469 Gene3D Transferase(Phosphotransferase) domain 1 220 468 - -
Pvu10g0940 469 Gene3D Phosphorylase Kinase; domain 1 125 219 - -
Pvu10g0940 469 CDD STKc_GSK3 135 427 IPR039192 -
Pvu10g0940 469 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 469 - -
Pvu10g0940 469 MobiDBLite consensus disorder prediction 1 78 - -
Pvu10g0940 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Pvu10g0940 469 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0940 469 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0940 469 MobiDBLite consensus disorder prediction 9 25 - -
Pvu10g0940 469 Pfam Protein kinase domain 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0940 469 MobiDBLite consensus disorder prediction 57 76 - -
Pvu10g0940 469 MobiDBLite consensus disorder prediction 26 49 - -
Pvu10g0940 469 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0940 Pvu-Chr10 33466402 33471125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0940 146 427 Core Cell Cycle Gene Families AT1G76540 35.862 2.66e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pvu10g0940 Pkinase 5.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0940 K00924 - gmx:100811346 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0738 8 6783650 6788589 Pvu10g0940 10 33466402 33471125 PCT