Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0928 ATGGCCACTTTAGGTTTCGAGGAATATGTTGATCCACTTAAGATTTACCTTGCCTCTTACAGAGAGATTGAGGGTGATTCAAAGGGTTCGGCCAAGGGTGGAGAGACATCTTCTAAGAGAGATGTTTATCCCAATCCTAATGTCCAGGTGGAGAATCTTGCTCATCAAGGTTCTTTTTCACAAGGTGTTAACTACACGAATTCTCAGCCCCAGGGTCCACATATGATAGTTCCGATGCAAGGCCAAGAGTAG 252 0.4444 MATLGFEEYVDPLKIYLASYREIEGDSKGSAKGGETSSKRDVYPNPNVQVENLAHQGSFSQGVNYTNSQPQGPHMIVPMQGQE* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0928 83 MobiDBLite consensus disorder prediction 60 75 - -
Pvu10g0928 83 MobiDBLite consensus disorder prediction 60 83 - -
Pvu10g0928 83 MobiDBLite consensus disorder prediction 24 45 - -
Pvu10g0928 83 PANTHER BNAA04G21250D PROTEIN 1 74 - -
Pvu10g0928 83 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 74 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0928 Pvu-Chr10 33202478 33202729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0928 1 83 CCAAT-HAP3 Transcription Factor Family AT3G53340 60.241 6.46e-27 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0928 K08065 - pvu:PHAVU_010G089000g 172.94