Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0927 ATGGACAATTATGGGTCTTCACAACATCCATATAGGTATCCAAACCCGTATTGGTACCCTCGCAACACCCCTCCATATGCACCATCACCACCACAACCACCGTATCCATATCCATCAAATCCTCCAGATACCTTCACCTACTCATACCCCCCAACTCCTCCACCACCCTCAGCACCTTATTCTAGCCACACAGACCATTCCTCATACCCTCCTCCTCCACCACCACCACCACCTCATGATTCCTTTGACTTTCCTATCCCTCAATCACCCAATCCTTACCCTCAACAAGGTCCTCCAGAATGGAGTGTCACAGGAGGTGAAATACCCCAAACTAGTGATAGTTATAACCCTGTCTGTTCTATTTACCCTCCTTTGGATGATGGCATGAGCATGATCAGGTTTTCTGATACCCCAAGTACACTAAACCCTCAACAAGGTCCTCCAGAATGGAGTGTCACAGGAGGTGAAATACCCCAAACTAGTGATAGTTATAACCCTGTCTGTTCTATTTACCCTCCTTTGGATGATGGCATGAGCATTATCAGGCTTTCTGATACCCCAAGTACACTTTCATTGTTGACAAATTCCCCTTCAATTTCAAGATATGATAGAGATGAGTTTTATGGTGGCTCTATCTACTCCCCCTCAGATTTGGATCAGGAAGACCCTACTAGACTTTCTTCTCAATCTGATGACTCAATGAATAATCAGAGCATGCAGATTGTCCCAGTTCAGAGCAAATCGTCTCTGCCAGTTCTGCTCCTGCATGGGAATTTAGATATTTGGGTTCATCGAGCCAAACACCTTCCAAACATGGACATGTTCCATAAGACTTTGGGAGATGTGTTTGGGAGGTTTCCTGGAAATGTCAACAAGATGGATGGAACGGTAAGCCGAAAGATTACCAGTGATCCTTATGTAACAATTTCTGTGTCAAATGCTGTAATTGGGAGGACTTTTGTGCTTAGCAATAGTGAAAACCCTGTGTGGGAGCAACATTTCTATGTTCCTGTTGCGCATCATGTAGCTGAAGTTCATTTTGTTGTGAAGGACAGTGATGTGGTGGGTTCACAGCTCATTGGTATTGTGGCAATTCCAGCTGAACAAATATACTCAGGGGAAAAGATACAAGAGACCTACCCCATTTTGAATAGCAGTGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGGAATTATCCATTCAGTACATTCCAATGGAGAAACTTATCACTTATCATCAAGGAGTTGGAGCTGGTCCTGAATATTTTGGGGTTTCTGGCACGTATTTTCCATTGAGGAAAGGTGGAACGGTAACTCTGTATCAAGATGCTCATGTCCCAGATGGTTGTCTGCCTAAAGTTATGCTTGAGCATCGCATGCATTATAATCATGGAAAGTGTTGGCATGACATCTTTGATGCCATACGTGCAGCTCAGAGATTGGTTTACATTACGGGGTGGTCACTGTGGCACAAAGTTAGGTTGGTAAGGGATGCTGGCAATGCAAGAAATTACAACCTGGGTGAACTTCTAAGGGCTAAGTCATCGGAGGGAGTAAGAGTGCTTCTCCTTGTATGGGATGACCCTACATCAAGAAGCATTCTTGGTTACAAAATGGATGGTGTAATGGCAACTCATGACGAGGAAACTAGACGATTTTTCAAGCACTCTTCTGTGCAAGTGCTGCTTTGTCCTCGCATTGCTGGAAAACGACACAGCTGGGCCAAACAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATGGCAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGCGATGGGCGATATGATGATCCCCACCATCCTCTCTTTAGGTCACTGCAGACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGCAATACTGGTGGCTGTCCACGGGAGCCATGGCATGACTTACATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGACCAACTTCGAGGAGCGCTGGTTAAGAGCTGCAAAACCTGAAGGGGTTAAAAAATTTACAAGTTCATATGATGATGCATTGCTTAAGCTAGACAGAATAAAAGATATTATCAGTTCTACTGATGATCTTAATTTTAATGAGGATAATCCTGCATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTCATGGGATTTCCGAAGGAGCCAAAAGATGCATCAAGTGTGAATCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGTATACATACAGCATATATAAAGGCCATTCGCGCTGCACAACATTACATTTATATTGAGAATCAATATTTCATTGGGTCTTCATATAATTGGAATCAATATAAAGACCTTGGAGCAAATAATTTAATTCCGATGGAAATTGCACTGAAGATTGCTGCAAAGATAAGGGCAAATGAGAGATTTGCAGTGTACATTGTTATTCCAATGTGGCCGGAGGGTGTCCCAACAGGTGCTGCCACTCAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGGGACAATTTACAAGGCTTTGGTTGAAGTTGGGCTTGAAGGAGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGTCTTGGTAATCGTGAGGCAATAGATATGTATGAGAATGTCAGGGTGTCTGGAACTCCTCCGCCAGCAAATAGTCCACAAGCAATTAGTAGAAACAATCGACGATTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCCAACATCAATCAACGCTCTATGGAAGGAACAAGGGACACCGAGATTGCAATGGGTGCCTACCAACCTTATCATACCTGGGCAAGAAGACAGTTTTATCCACTTGGGCAGATCCATGGATATAGAATGTCACTTTGGGCCGAACATACAGGTACCATTGAAGACTGTTTTTCACAACCAGAAAGCCTCGAATGTGTTAGGAGGATTAGAAGAATGGGTGAACTGAACTGGAAACAATTTGCATCAAATGATGCAACAGAGATGACAGGGCATCTGCTCAAGTACCCAGTAGAAGTCGATAGAAAGGGTAAGGTCAGATCCCTTCCTGGCCAGGATGAGTTCCCAGATGTTGGAGGAAAGATTATAGGATCATTTATTGCCATTCAGGAAAATCTAACCATTTGA 3213 0.427 MDNYGSSQHPYRYPNPYWYPRNTPPYAPSPPQPPYPYPSNPPDTFTYSYPPTPPPPSAPYSSHTDHSSYPPPPPPPPPHDSFDFPIPQSPNPYPQQGPPEWSVTGGEIPQTSDSYNPVCSIYPPLDDGMSMIRFSDTPSTLNPQQGPPEWSVTGGEIPQTSDSYNPVCSIYPPLDDGMSIIRLSDTPSTLSLLTNSPSISRYDRDEFYGGSIYSPSDLDQEDPTRLSSQSDDSMNNQSMQIVPVQSKSSLPVLLLHGNLDIWVHRAKHLPNMDMFHKTLGDVFGRFPGNVNKMDGTVSRKITSDPYVTISVSNAVIGRTFVLSNSENPVWEQHFYVPVAHHVAEVHFVVKDSDVVGSQLIGIVAIPAEQIYSGEKIQETYPILNSSGKPCKPGAVLELSIQYIPMEKLITYHQGVGAGPEYFGVSGTYFPLRKGGTVTLYQDAHVPDGCLPKVMLEHRMHYNHGKCWHDIFDAIRAAQRLVYITGWSLWHKVRLVRDAGNARNYNLGELLRAKSSEGVRVLLLVWDDPTSRSILGYKMDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGNGKRKIVAFVGGLDLCDGRYDDPHHPLFRSLQTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPEGVKKFTSSYDDALLKLDRIKDIISSTDDLNFNEDNPASWHVQIFRSIDSNSVMGFPKEPKDASSVNLVCGKNVLIDMSIHTAYIKAIRAAQHYIYIENQYFIGSSYNWNQYKDLGANNLIPMEIALKIAAKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYGTIYKALVEVGLEGAFSPQDYLNFFCLGNREAIDMYENVRVSGTPPPANSPQAISRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPYHTWARRQFYPLGQIHGYRMSLWAEHTGTIEDCFSQPESLECVRRIRRMGELNWKQFASNDATEMTGHLLKYPVEVDRKGKVRSLPGQDEFPDVGGKIIGSFIAIQENLTI* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0927 1070 SUPERFAMILY Phospholipase D/nuclease 739 1002 - -
Pvu10g0927 1070 SMART pld_4 581 616 IPR001736 GO:0003824
Pvu10g0927 1070 SMART pld_4 916 943 IPR001736 GO:0003824
Pvu10g0927 1070 MobiDBLite consensus disorder prediction 22 118 - -
Pvu10g0927 1070 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 916 943 IPR001736 GO:0003824
Pvu10g0927 1070 Gene3D Endonuclease Chain A 724 962 - -
Pvu10g0927 1070 Pfam Phospholipase D Active site motif 582 616 IPR001736 GO:0003824
Pvu10g0927 1070 Pfam Phospholipase D Active site motif 917 943 IPR001736 GO:0003824
Pvu10g0927 1070 MobiDBLite consensus disorder prediction 217 235 - -
Pvu10g0927 1070 MobiDBLite consensus disorder prediction 211 235 - -
Pvu10g0927 1070 Pfam Phospholipase D C terminal 990 1060 IPR024632 -
Pvu10g0927 1070 Gene3D C2 domain 253 391 IPR035892 -
Pvu10g0927 1070 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 581 616 IPR001736 GO:0003824
Pvu10g0927 1070 PANTHER PHOSPHOLIPASE D 172 1070 IPR015679 -
Pvu10g0927 1070 SUPERFAMILY Phospholipase D/nuclease 466 680 - -
Pvu10g0927 1070 SMART C2_3c 258 379 IPR000008 -
Pvu10g0927 1070 Gene3D Endonuclease Chain A 451 698 - -
Pvu10g0927 1070 PANTHER PHOSPHOLIPASE D ALPHA 1 172 1070 - -
Pvu10g0927 1070 MobiDBLite consensus disorder prediction 22 97 - -
Pvu10g0927 1070 ProSiteProfiles C2 domain profile. 239 380 IPR000008 -
Pvu10g0927 1070 CDD C2_plant_PLD 252 403 - -
Pvu10g0927 1070 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 255 405 IPR035892 -
Pvu10g0927 1070 Pfam C2 domain 257 382 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0927 Pvu-Chr10 33168752 33179283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0927 31 1070 Phospholipase D Gene Family (Wang group) AT2G42010 66.047 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0927 K01115 - gmx:100805294 1639.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0927 10 33168752 33179283 Pvu10g0927 10 33168752 33179283 ECH