Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0926 ATGGATTTTCATACCGATCCACTTGTTGCTATGATTATGTTTGGGGGGTTTCATGTATACTTCCTTTTAAAGCCAATAACTTTTGTTTTGCCTGTGTTCTGTTCATGTTGGGTGCTTCAGATTTTAACTTCTGCACTGTTTACTTGCCAGCAAGAATTTCATGATAATGACCCTGAACCTGGTATTGTTGCTGCAACCCCCACGTTGAGTTTCAACCATGAACACTTCGTTTCAACGGGAAGCACACAGTGTGTGATTTGTTTGGAAGAGTTTAAAGACAACGAAGTACTGCAGATCACAAAGTGTGGTCACACATTTCACATTTATTGCATTCATACGTGGCTGAAAAAAAATTCAACCTGTCCAGTATGTCGATTGTCAGTATCAAATTCTTCCGAATCAGAACATGTAATTACCATTAGATATTCTCTGGCTGAGTCCAGTAGTACTTTAGAAAGGAACATAAACACTGAGCAAGAGTCCAGTAATACTTTAGAAAGGACCGTAAACACTGAGCAAGTTTGTGCTTAA 531 0.3879 MDFHTDPLVAMIMFGGFHVYFLLKPITFVLPVFCSCWVLQILTSALFTCQQEFHDNDPEPGIVAATPTLSFNHEHFVSTGSTQCVICLEEFKDNEVLQITKCGHTFHIYCIHTWLKKNSTCPVCRLSVSNSSESEHVITIRYSLAESSSTLERNINTEQESSNTLERTVNTEQVCA* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0926 176 SMART ring_2 84 124 IPR001841 -
Pvu10g0926 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 135 IPR013083 -
Pvu10g0926 176 PANTHER OS11G0150450 PROTEIN 56 159 - -
Pvu10g0926 176 SUPERFAMILY RING/U-box 83 131 - -
Pvu10g0926 176 Pfam Ring finger domain 83 125 IPR001841 -
Pvu10g0926 176 ProSiteProfiles Zinc finger RING-type profile. 84 125 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0926 Pvu-Chr10 33062242 33063246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0926 55 128 C3H Transcription Factor Family AT5G47610 40.506 1.53e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0926 - - pvu:PHAVU_010G088800g 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0926 10 33062242 33063246 Pvu10g0926 10 33062242 33063246 ECH