Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0923 ATGGCTACTTCTTCACCAACCTTCATCGCCATCCTCCTCCTCATGCTGCTCCACCTCCACTCATCGGCAGCGCTTCCTCTCTCCGTGGGGAGCCCCGACGAAGACGTCATAGTTTCGAGGCCCAAGGGGACGTTCACGGCGGGGTTCAGGCGCGTGGGAGAGAACGCGTACTGCTTCGGCGTGTGGTTCTCGCAGGCAGAGAAGCACGTGGTGTGGATGGCCAACCGCGACGTTCCAGTGAACGGGAAACGCTCCTCGCTCTCCCTCCTCAAGAACGGCAACCTCGTGTTGTCTGATGCCGGACAGTTCGACGTTTGGGACACGAAGACTCTGTCGGCGAAGCCGTTGGAGTTGCATTTACACGACACCGGCAATCTCGTGCTCCGGGAACAGACCAATAGAAGCTCTGTTTTGTGGCAGAGCTTCAATTTTCCCACTGATACACTCCTCCCTGGCCAGATTCTGACCAGGTTCACGACGCTTGTTTCGTCGAGAAGTGAGGGAAACTATTCCTCTGGGTTTTACAAACTCTTCTTCGACAACGACAACGTTTTCCGTCTTCTGTATGAGGGTCCTCAAGTTTCAAGCGTTTACTGGCCGGATCCTTGGCTAGTTAGCAACAACGTTGGGAGTGGTAACGGAAGATCCTCGTACAATAGTAGCAGAGTTGCAGTTCTGGATGAGTTGGGCAAATTCAGTGCTTCTGATGCTTTCAGTTACAAGACAATTGATTATGGGTTACTCCTTCAACGAAGGTTGACCCTTGACTATGATGGCAATGTTCGTATCTATAGTAGAGAAAATGGTCAGGAAGATTGGTCAATAACAGGGCAATTTAAATCACAACCTTGTTTCATTCATGGGATCTGTGGACCCTACAGTATATGCAACCATGAACAAGCAACTGGGAGAAAGTGTGTGTGTCTTGAAGGGTATAGTTGGATTGATAGTCAAGATTGGTCTTTGGGTTGCAAACCAAATTTTCAACCTACTTGTGATAACAAGACAGAATATCGGTTTGTAGCCTTGTATGAAGTAGATTTTTATGGATATGACTATGGATCTTCCTTTTCAAATTACACATATAAACAATGTGAGAAATGGTGCTCGGAATTGTGCCAGTGCAAGGGCTTTCAGTTCAGCTTTCCCCAAGATAATGGGCCCTTTTGGTGTTACCCAAAGACGCAGTTGCTAAATGGACACCGTTCACCCGGTTTCCGGGGACAATTTTTCTTGCGTCTGCCAAAAGGAAGTGCTAAAGAGAACAACTTGCAAAACAATGAGGGCTTGGTTTGTCCGAGAAATGCAGAAAAAGTACTAGAAAGACCATATGTGAAAGGCAAGGAAAATGGGTCCGTTAAGTTCGTGCTTCGGTTTGCAGTTGGCTTAGGAGGGTTTGAGGTCGTGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAGTAGCAACCATTTGGTTAGGGAAGACCAACAAGGGTATGTTCTTGCCGCAGCTGCAGGGTGCAGAAGGTACACTTATTCTGAACTGAAACAAGCCACAAAGGGTTTTAGTGAAGAGATTGGAAGGGGTGCCGGGGGGACAGTGTACAAGGGTATGTTATCAGATAACCGAATTGCAGCAATAAAAAAGCTACACGAATTTGCAGACCAAGGAGAGAGTGAGTTCCTCACTGAAATGAGCATCATTGGAAGGCTTAATCACATGAACTTAATTGGCATGTGGGGTTATTGTGTAGACGGAAAACACAGGATACTGGTTTATGAGTACATGGAAAATGGCTCTTTGGCTAATAATCTTTCGTCAAATTCACTTGATTGGAGCAAGAGGTATAACATTGCCATGGGAATGGCAAAGGGTTTGGCCTATTTACATGAAGAGTGCTTGGAGTGGATTTTACACTGTGATATCAAGCCTCAAAACATACTTCTTGACTCTGATTACCAACCCAAGGTGGCTGATTTTGGCTTGTCCAAGCCATTGAATAGAAACAACCTCAACAACTCAAGCTTCTCTAGAATAAGAGGCACTAGGGGTTACATGGCACCAGAGTGGGTTTTCAACTTGCAAATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAGGAGTCCAATGATAGGTGTCCAAGACACAGAACCAGGGGCAGAGTCGCATGAGAGGTTGGCAACATGGGTGAGGGAGAAAAGGAGGAAAGCACCAGAAGGGGCATCTTGGGTTGAACAAATTGTTGACCCCACTTTAGGATCAGATTACAATGTGAAGCAGTTGGAGATATTGGCAAAAGTGGCTTTGGATTGTGTAGAGGAAGAGAAAGATGTGAGACCTAGCATGAGTCAAGTCGTTGAGAGGCTCCAAAGTCATGAACATGGTTCTTAA 2400 0.4621 MATSSPTFIAILLLMLLHLHSSAALPLSVGSPDEDVIVSRPKGTFTAGFRRVGENAYCFGVWFSQAEKHVVWMANRDVPVNGKRSSLSLLKNGNLVLSDAGQFDVWDTKTLSAKPLELHLHDTGNLVLREQTNRSSVLWQSFNFPTDTLLPGQILTRFTTLVSSRSEGNYSSGFYKLFFDNDNVFRLLYEGPQVSSVYWPDPWLVSNNVGSGNGRSSYNSSRVAVLDELGKFSASDAFSYKTIDYGLLLQRRLTLDYDGNVRIYSRENGQEDWSITGQFKSQPCFIHGICGPYSICNHEQATGRKCVCLEGYSWIDSQDWSLGCKPNFQPTCDNKTEYRFVALYEVDFYGYDYGSSFSNYTYKQCEKWCSELCQCKGFQFSFPQDNGPFWCYPKTQLLNGHRSPGFRGQFFLRLPKGSAKENNLQNNEGLVCPRNAEKVLERPYVKGKENGSVKFVLRFAVGLGGFEVVCIFMVWCFLFRSSNHLVREDQQGYVLAAAAGCRRYTYSELKQATKGFSEEIGRGAGGTVYKGMLSDNRIAAIKKLHEFADQGESEFLTEMSIIGRLNHMNLIGMWGYCVDGKHRILVYEYMENGSLANNLSSNSLDWSKRYNIAMGMAKGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKPLNRNNLNNSSFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSPMIGVQDTEPGAESHERLATWVREKRRKAPEGASWVEQIVDPTLGSDYNVKQLEILAKVALDCVEEEKDVRPSMSQVVERLQSHEHGS* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0923 799 SUPERFAMILY Protein kinase-like (PK-like) 499 792 IPR011009 -
Pvu10g0923 799 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Pvu10g0923 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 200 IPR036426 -
Pvu10g0923 799 PIRSF SRK 1 798 IPR024171 GO:0004674
Pvu10g0923 799 CDD STKc_IRAK 520 793 - -
Pvu10g0923 799 SMART serkin_6 514 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0923 799 Gene3D Phosphorylase Kinase; domain 1 480 589 - -
Pvu10g0923 799 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 8 798 - -
Pvu10g0923 799 Pfam Protein kinase domain 517 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0923 799 ProSiteProfiles Protein kinase domain profile. 514 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0923 799 Pfam D-mannose binding lectin 70 156 IPR001480 -
Pvu10g0923 799 CDD PAN_AP_plant 328 415 - -
Pvu10g0923 799 Gene3D - 30 145 IPR036426 -
Pvu10g0923 799 Pfam S-locus glycoprotein domain 237 312 IPR000858 GO:0048544
Pvu10g0923 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Pvu10g0923 799 SMART blect_4 24 145 IPR001480 -
Pvu10g0923 799 Gene3D Transferase(Phosphotransferase) domain 1 590 798 - -
Pvu10g0923 799 CDD B_lectin 25 145 IPR001480 -
Pvu10g0923 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 798 - -
Pvu10g0923 799 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0923 Pvu-Chr10 32987570 32990643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0923 504 799 Trihelix Transcription Factor Family AT5G38560 41.528 8.45e-68 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu10g0923 Pkinase 1.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0923 - - pvu:PHAVU_010G088500g 1471.83