Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0917 CATCTGAAGCAAGAAGCAGCAAACATGATGAAGAAGATTGAACTTCTTGAAGCTGCAAAACGGAAATTCTTGGGAGAAGGTTTAGGGTCTGGCTCCATTGAGGAATTGCAACGAATAGAACAACAGTTGGAGAGGAGTTTAATTAATGTTCGAGCAAGAAAGCTCCAGGTTTTCATGGAACAAATTCAGCAACTGAAAGAAAAGGAAAAAGCCCTAATTGATGAAAATGCCAGGCTCTCTGAGGAGCATGGCATCCATCTACAGCTACCAACAAAGGATCAGAATGAAACTCAACCCCAATACTGTGCAGAAAGTAGCCCAAGTTCAGATGTGGAGACTGAATTATTCATTGGACTTCCAGATACAAGAACAAGACGCCTCTCTCATCAGGTTTAG 396 0.4192 HLKQEAANMMKKIELLEAAKRKFLGEGLGSGSIEELQRIEQQLERSLINVRARKLQVFMEQIQQLKEKEKALIDENARLSEEHGIHLQLPTKDQNETQPQYCAESSPSSDVETELFIGLPDTRTRRLSHQV* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0917 131 Pfam K-box region 2 82 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu10g0917 131 Coils Coil 33 53 - -
Pvu10g0917 131 PANTHER MADS-BOX TRANSCRIPTION FACTOR 56 6 124 - -
Pvu10g0917 131 MobiDBLite consensus disorder prediction 90 109 - -
Pvu10g0917 131 MobiDBLite consensus disorder prediction 83 109 - -
Pvu10g0917 131 ProSiteProfiles K-box domain profile. 1 93 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu10g0917 131 Coils Coil 2 22 - -
Pvu10g0917 131 Coils Coil 55 82 - -
Pvu10g0917 131 PANTHER MADS BOX PROTEIN 6 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0917 Pvu-Chr10 32835224 32839144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0917 1 70 MADS-box Gene Family AT2G45660 74.286 2.58e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0917 - - pvu:PHAVU_010G0880001 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0917 10 32835224 32839144 Pvu10g0917 10 32835224 32839144 ECH
Pvu8g0748 8 6933835 6937059 Pvu10g0917 10 32835224 32839144 PCT