Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0896 ATGTGCGCAGGGAAGAAGAGTAAGGTACAGTTCTGTTGCATTTCCCACGAATTCTTTCGAATTGCGTACGAAAACCCTAACAAAATCGCAGTGATTCACGCTACCGGCGGGGCGCACCTTTGCCGGGAGTTTCGCCGCGAAAATGCTACCACCATTGACTTCAACGGCGACATCGCCACCCTCTTAGAGAAGCGCGTCGAGTCCATATCTCCGCCATTCTACCCTGGGGACCGGTGCTTCACTTACTCTCACGTCTTGAACGCGGTTCGTTCCCTCAGCTCACGCCTCTGCTCTATCCTGCTTGGTGGGGATGACCCACACTTGATCACTGCACAATGTCCAGGTAGCAATGGTGTCATCCATGAAGAGGGAACTGTACAGAAACCCGAGTCCTTGGAAACTGTCATGCCTAGTGAAGAGGCGATGGCTGAATCAAGTGAAGAGTATAGGCCAAAGATAGTGGGGATTTATATGTCTCCTTCTGTTGAATATATTGTAGCTGTTCTTTCGGTTATGAGGTGTGGAGTAGCCTTCCTGCCTCTGGACCCGTTTTGGCCAAATGAAAGGATATTGCTTGTTACCTCTTCTTCGAATGTTGACCTCATTATAGGATCCCAATCTTCTTTTGGTAAAAGAAAGTTGGACAAGCTTGACGAATCACATTGGCTGGTAAAGTCAAGTAGTTGTCCTGTTTTGAATTACTCCATCGACCAAAAACTACAAGTTTGTAGTGGTCCAACAGATTTAGCATGGCCGTGTGCCAATGAAAAACAAAGATCATTCTGCTATGTGATGTACACATCTGGATCAACTGGAAAGCCTAAAGGAGTGTGTGGCACTGAACAAGGTCTTTCTAATCGCTTTTCATGGATGCAAGGAATGTATCCACTGAATGGACATGAACTGTTGTTGTTTAAGACATCCGTTAGCTTCATTGATCACTTGCAAGAATTTCTCAGTTCAATTTTGACTGCTTGTGTGTTAGTTATTCCTCCCTTCAACGAGCTAAAAGAAAATTTGTATTCTATAATAGATTTCCTGCAGGCATATTTTGTTAATAGGCTCACAACTGTTCCATCACTAATGAAGACTATTCTTCCTGGATTGAAAACCAATGCTAACATGCGGGTTGAAAATTCCCTGAAATTGCTTGTGCTTAGCGGTGAAACTTTTCCTTTGACCTTGTGGGAGATGCTTTCAACTCTATTACCGAAGACATCAGTCTTGAATTTATATGGAAGCACTGAGGTCTCCGGTGACTGTACATATTTTGATTGCAAGAGAATGCCATTTATTTTTAAGGAAGAAAGGCTAACCAGTGTTCCAATAGGTTTACCCATTCCTAACTGTGATGTGATTCTTCTTAGTGAAAATGGTGCATCAAACGAGGGAGAGCTATACGTTGGTGGTCCTTGCATCTTTAGGGGTTACTACAACGAATCTAAGGAAATGTCTGATGCATTTGCAAAGTTGCTTCCACGTTATAGCTGTGATGATTTTGTCAATGGTTGCCATGATAAATTATACTTTAGAACAGGTGATTTAGTCAAACAGTTACCTAGTGGTGACTTGGTATTTTTGGGAAGAAAAGATCGCATTATAAAAATCAATGGACAGCGTATTGCCCTAGAAGAGGTTGAAGATTTGTTAAGGGCGCATCCACATATAAATGATGCTGCTGTAGTTTGTCGAAATAATAAAGCAGAACTTGTGTTTCTTGAAGCCTTTATCATACTGAAGAAAAAAGAAAGCTTGGGTGAATCATTAATACCGGCAATCAGAAATTGGATGATTAACAAACTTCCTTCTGTTGTACTTCCCAACCATTTCTTCTTTATAGAATCATTCCCCGTGTCTCCTAGTGGTAAGGTTAATTATGAATTGTTGGTTGGCTCAACATTATTGACAAAGAATGTCAAGGATAAACTTGGTAACATCGATTGCAGCAATCTTTTGCAACTTATAAAAAAGGCATTTCATGATGCTTTAATGATTGAAAAGGTTTGTGATGATGATGATTTCTTTACGATGGGTGGTAACTCTCTTTCTGCTGCACATGTTGCTTACAATTTGGGGATTGACTTGAGATTTCTCTACTACTATCCAAGTGCTCTTAAGCTTTGTAGGGCTCTTCTCCAGAAAAAAGGATCATGCTCTTTGCATGACAGTCTGGATAGTTGTTTGCAAATAAACACAGACAGACAAGATAACCATATTTCTAATAATTGTACTGAAAATTATAGTCCTCTTGAGTCAAGGATGACTTCCAAAGATAATGATGACAGTTCTTCTCTTTCTAAACGTTTAAAGAGGGGTTCAACAGATGTTACATCATGGGGTGATGAATCATTCCCATGGTATTCCCCACTATTATCATTCTCATTTAACCGATGCAACAAGGTGTTGCATAAAGGGAAGCAGGAAGTAGTTGATATGCACCAAAAAACTTGGTCAGCAGACATTCCAAGAGGCAACAGAGGTCACATGAAAGACTTTTGGAAAGTTTACATGGATTCTTGTGTTGATGCTTCACCAATGCTTGTATTTAAAGGCACAAACGTTTATTTGTTCGTTGGATCTCACTCTCATAAATTTCTCTGCATAAATGCTCGAAGTGGTTCTGTCCAGTGGGAGATCAAACTAGAAGGGCGCATTGAATGCACAGCAGCAATTGTTTCTGATTTTTCCCAGGTTGTTGTTGGATGTTACATGGGAAAAATATATTTTCTTGATTTTTTGTATGGACACATCTGTTGGATTTTCCAAACTTCTGGTGAGGTAAAATCACAGCCGGTTGTAGACAAATGCAGACAATTGATCTGCAATACACTCCTCCAAAAAACAACCTTGTCCTCAAGGTTGGAGCAGTGGAACCTTGATCCCATGGCTCATCTTCATCACCATGATCTTTATCTACCCTTCCTGAAAGTATTGTGA 2937 0.4062 MCAGKKSKVQFCCISHEFFRIAYENPNKIAVIHATGGAHLCREFRRENATTIDFNGDIATLLEKRVESISPPFYPGDRCFTYSHVLNAVRSLSSRLCSILLGGDDPHLITAQCPGSNGVIHEEGTVQKPESLETVMPSEEAMAESSEEYRPKIVGIYMSPSVEYIVAVLSVMRCGVAFLPLDPFWPNERILLVTSSSNVDLIIGSQSSFGKRKLDKLDESHWLVKSSSCPVLNYSIDQKLQVCSGPTDLAWPCANEKQRSFCYVMYTSGSTGKPKGVCGTEQGLSNRFSWMQGMYPLNGHELLLFKTSVSFIDHLQEFLSSILTACVLVIPPFNELKENLYSIIDFLQAYFVNRLTTVPSLMKTILPGLKTNANMRVENSLKLLVLSGETFPLTLWEMLSTLLPKTSVLNLYGSTEVSGDCTYFDCKRMPFIFKEERLTSVPIGLPIPNCDVILLSENGASNEGELYVGGPCIFRGYYNESKEMSDAFAKLLPRYSCDDFVNGCHDKLYFRTGDLVKQLPSGDLVFLGRKDRIIKINGQRIALEEVEDLLRAHPHINDAAVVCRNNKAELVFLEAFIILKKKESLGESLIPAIRNWMINKLPSVVLPNHFFFIESFPVSPSGKVNYELLVGSTLLTKNVKDKLGNIDCSNLLQLIKKAFHDALMIEKVCDDDDFFTMGGNSLSAAHVAYNLGIDLRFLYYYPSALKLCRALLQKKGSCSLHDSLDSCLQINTDRQDNHISNNCTENYSPLESRMTSKDNDDSSSLSKRLKRGSTDVTSWGDESFPWYSPLLSFSFNRCNKVLHKGKQEVVDMHQKTWSADIPRGNRGHMKDFWKVYMDSCVDASPMLVFKGTNVYLFVGSHSHKFLCINARSGSVQWEIKLEGRIECTAAIVSDFSQVVVGCYMGKIYFLDFLYGHICWIFQTSGEVKSQPVVDKCRQLICNTLLQKTTLSSRLEQWNLDPMAHLHHHDLYLPFLKVL* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0896 978 ProSitePatterns Putative AMP-binding domain signature. 264 275 IPR020845 -
Pvu10g0896 978 Gene3D - 531 635 IPR045851 -
Pvu10g0896 978 Pfam AMP-binding enzyme C-terminal domain 545 623 IPR025110 -
Pvu10g0896 978 Gene3D - 126 530 IPR042099 -
Pvu10g0896 978 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 822 935 IPR011047 -
Pvu10g0896 978 SUPERFAMILY ACP-like 649 711 IPR036736 -
Pvu10g0896 978 MobiDBLite consensus disorder prediction 740 768 - -
Pvu10g0896 978 PANTHER EBONY 11 943 - -
Pvu10g0896 978 Gene3D - 805 948 IPR015943 GO:0005515
Pvu10g0896 978 CDD A_NRPS 150 629 - -
Pvu10g0896 978 Gene3D - 649 711 IPR036736 -
Pvu10g0896 978 Pfam AMP-binding enzyme 153 536 IPR000873 -
Pvu10g0896 978 MobiDBLite consensus disorder prediction 754 768 - -
Pvu10g0896 978 SUPERFAMILY Acetyl-CoA synthetase-like 152 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0896 Pvu-Chr10 32073311 32088931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0896 257 643 Monolignol Biosynthesis Gene Families AT4G19010 24.938 1.11e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0896 K00142 - gmx:100820175 1513.43