Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0892 ATGCAGAACTTTTTAGCGCTGTGTGCAAGTGGTTACTATGATGGGACTATATTTCACCGCAACATTAAGGGTTTTATGATTCAAGGTGGAGATCCCACTGGAACTGGCAAAGGGGGAACCAGTATATGGGGCAAGAAATTTAATGATGAGATACGAGAATCACTGAAGCATAATGCAAGGGGAATATTGGCAATGGCTAACAGTGGTCCAAATACTAACGGAAGTCAATTCTTCATGACTTACGCAAAGCAGCCACATTTAAATGGGCTATACACTGTGTTTGGAAGAGTAATCCATGGATTTGAAGTTCTTGATCTCATGGAAAAGACTCAAACTGGAGCAGGAGATCGACCACTTGCAGAGATAAGGCTCAATCGTGTAACAATACATGCTAATCCTCTTGCTGGTTGA 411 0.4185 MQNFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILAMANSGPNTNGSQFFMTYAKQPHLNGLYTVFGRVIHGFEVLDLMEKTQTGAGDRPLAEIRLNRVTIHANPLAG* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0892 136 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 129 IPR002130 GO:0000413|GO:0003755
Pvu10g0892 136 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 2 135 - -
Pvu10g0892 136 SUPERFAMILY Cyclophilin-like 2 133 IPR029000 -
Pvu10g0892 136 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 30 IPR002130 GO:0000413|GO:0003755
Pvu10g0892 136 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 76 IPR002130 GO:0000413|GO:0003755
Pvu10g0892 136 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Pvu10g0892 136 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 89 104 IPR002130 GO:0000413|GO:0003755
Pvu10g0892 136 Gene3D - 1 136 IPR029000 -
Pvu10g0892 136 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 128 IPR002130 GO:0000413|GO:0003755
Pvu10g0892 136 CDD Cyclophilin_PPIL3_like 2 129 - -
Pvu10g0892 136 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 13 30 IPR020892 GO:0003755|GO:0006457
Pvu10g0892 136 PIRSF Peptidylpro_ismrse 1 133 IPR024936 GO:0003755
Pvu10g0892 136 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 135 IPR044666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0892 Pvu-Chr10 31980528 31982236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0892 2 133 U-box Gene Family AT5G67530 55.303 1.13e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0892 K12734 - gmx:100306466 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0892 10 31980528 31982236 Pvu10g0892 10 31980528 31982236 ECH