Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0884 ATGGATTATGGAGGAAAGATTGGTGGAAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTGCACATTTTGCTGCAGTGCACAAGGTGTTTGGTGCAAGCAATGCCTCTAAGTTACTCATGAGAATCCCAGCACACAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAGGCTTTAGCTAGGGCTAGAGACCCTGTTTATGGCTGTGTTGGTCACCTCTTTGCACTTCAACAACAGGTGATGAACTTGCAGGCTGAGTTAACCTATGTCCAAGCCCGTCTTGCCACAATGCAGCGCATGCCAATGGCAGTAGCTCCTCTTCTACACCCTCAAAGTTCTTCACCACAAACTCTTCCTTCCTCAGATCAATTGGCATCAAATGTTGACATGCAAAGTGTTCCTATTATGCACTATGATCCTCTTCAACCACATTCAGCATCATTGGAGTTAAGCAGCATCCTTTTCAATCAATCAGATCAACAAGTGGAGGATAGGGAACTCCAAGCTTTGGCTCGAGAATTTGTGACCAAATACTTGCCCGGAGTAAGATTCCAGCAATCTAACTCTCCCTAA 639 0.4538 MDYGGKIGGSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRMPMAVAPLLHPQSSSPQTLPSSDQLASNVDMQSVPIMHYDPLQPHSASLELSSILFNQSDQQVEDRELQALAREFVTKYLPGVRFQQSNSP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0884 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 10 202 - -
Pvu10g0884 212 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Pvu10g0884 212 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Pvu10g0884 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0884 Pvu-Chr10 31635596 31639916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0884 13 210 AS2 family AT4G00210 55.140 9.66e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu10g0884 LOB 2.5e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0772 8 7225971 7229473 Pvu10g0884 10 31635596 31639916 PCT