Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0881 ATGGAAGCCAGAGAAGGTATCAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCTTATCATGTGGCTCCAAGAAGTGAAGCTCCAAACCAGGTTCATGTCCCTGATGGTGGTGGAGGCGGTGGCGGCATTGGTGGTGCTGCAGCTATTGGTGTCTCACCTGTGAGTGTGGGGTTGGATGGAACAACAAAGAAGAAACGGGGTAGACCAAGGAAATATGGGCCTGATGGGTCTGTCACTATGGCATTGTCTCCAATGCCAATCTCGTCTTCTGCACCGTCTTCTAATAATTTTTCATCCGGCAAGCGGGGGAAAATGCGGGGTATGGAGTATAAGCAGTCGAAAAAACTTGGTTTGGATTATCTAGGTGACTTGAATTCATGCTCTGATGGTACAAATTTTATGCCACACATCATCACTGTCAATGCTGGTGAGGACATTACAATGAAGGTGATATCCTTCTCTCAACAAGGGCCAAGAGCTATATGTATCTTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGACAGCCTGATTCTTCTGGGGGTACTTTAACTTATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGACAACCAAGGTACAAGAAGCAGGTCTGGTGGAATGTCGGTCTCGTTGGCTAGCCCTGATGGCCGAGTTGTCGGTGGTGGAGTTGCCGGTCTTCTTGTAGCTGCTAGCCCTGTGCAGGTGGTGGTGGGAAGCTTTTTACCAAGCAGCCAGCAAGAACAGAAACTAAAGAAGCCCAAGTCTACTGATTATGCAGCAGCAGCAGCCGCTGTTTCTCCAGTTATTGCAGTATCTCCTGCACCACCACCTCCACCACCACCTCCAACCAATGCTGAAAAAGAGGATGTGAATATTAATCTAATGGGTGGAGCACATGTGCTGCAAAATTCTGGAACTCTTAACTCTAACCTCAGCCCTCCCAATGCCTTTAGAAGAGACAACTGGGTCAACATGCACTCTATGCCAGACTCAAGAAAGTCAGCTACTGATATTAACATATCTTTGCCTGATTGTTAA 1071 0.4687 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGGGGGGGIGGAAAIGVSPVSVGLDGTTKKKRGRPRKYGPDGSVTMALSPMPISSSAPSSNNFSSGKRGKMRGMEYKQSKKLGLDYLGDLNSCSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSSQQEQKLKKPKSTDYAAAAAAVSPVIAVSPAPPPPPPPPTNAEKEDVNINLMGGAHVLQNSGTLNSNLSPPNAFRRDNWVNMHSMPDSRKSATDINISLPDC* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0881 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 251 IPR005175 -
Pvu10g0881 356 ProSiteProfiles PPC domain profile profile. 133 275 IPR005175 -
Pvu10g0881 356 Gene3D - 138 269 - -
Pvu10g0881 356 MobiDBLite consensus disorder prediction 57 108 - -
Pvu10g0881 356 MobiDBLite consensus disorder prediction 85 104 - -
Pvu10g0881 356 CDD DUF296 138 228 IPR005175 -
Pvu10g0881 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 355 IPR039605 GO:0003680
Pvu10g0881 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 256 - -
Pvu10g0881 356 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0881 Pvu-Chr10 31525272 31531810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0881 10 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.811 8.35e-94 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0881 - - vun:114167232 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0881 10 31525272 31531810 Pvu10g0881 10 31525272 31531810 ECH
Pvu8g0774 8 7270086 7274801 Pvu10g0881 10 31525272 31531810 PCT