Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0876 ATGGACCTAGATAAGCCGAAAAGTGGCCACTGCAGCAATGCATCATTTTCATCCAATCTTCAGCTCTATTCTTACTGCCATGGCTCTTGCTCATGGCGTATCCGCTTTGCTTTATGCCTCAAAGGAATTCCATATGAGTACAAAGAAGTGGACCTAGCAAAAGGAGAGCAGTACAGTCCAGAATTCGAGAGACTGAATCCTCTGCACTATGTTCCAGTATTAGTTGATAATAATGTTGTGGTTTCAGATTCTTATGCAATATTTCTGCATTTGGAGGAAAAATATACTCAGAAGCCACTGTTGCCAGTTGATCCACAGCTCAGAGCTCTCAATCTTCAGGTAGCAAGTATTGTTCACTCCAGTATACAGCCTCTTAACATGCTTGCTGTTCTGAAAGATATGGAGAAAATGTTTGGTGCAGAATCAAAACCGTGGGCTCAATTTACCATTGACAAAGGTTTCTCAGCTCTTGAAAAGCTGCTGAAGAATTTTGCTGGAACATATGCCACAGGGGAATGTATCTATATGGCTGATGTATTTTTGGCACCACAGATAGAACAGGCAGTTCAGAGGTTTGATATCGATATGTCCAAATTCCCTGCCCTGAGTAGATTATATGAAACATACAAAGCTTTGCCAGAGTTTCAAGCCTCATCACCCCAAAGACAACATGAGGCCTTCATTCACAAACCTTGA 696 0.4167 MDLDKPKSGHCSNASFSSNLQLYSYCHGSCSWRIRFALCLKGIPYEYKEVDLAKGEQYSPEFERLNPLHYVPVLVDNNVVVSDSYAIFLHLEEKYTQKPLLPVDPQLRALNLQVASIVHSSIQPLNMLAVLKDMEKMFGAESKPWAQFTIDKGFSALEKLLKNFAGTYATGECIYMADVFLAPQIEQAVQRFDIDMSKFPALSRLYETYKALPEFQASSPQRQHEAFIHKP* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0876 231 SFLD Main (cytGST) 20 210 - -
Pvu10g0876 231 PANTHER MALEYLACETOACETATE ISOMERASE 10 226 - -
Pvu10g0876 231 CDD GST_C_Zeta 105 223 IPR034330 -
Pvu10g0876 231 Pfam Glutathione S-transferase, C-terminal domain 140 216 IPR004046 -
Pvu10g0876 231 Gene3D - 106 227 - -
Pvu10g0876 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 231 IPR010987 -
Pvu10g0876 231 SFLD Glutathione Transferase (cytosolic) 20 210 IPR040079 -
Pvu10g0876 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Pvu10g0876 231 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 10 226 - -
Pvu10g0876 231 Pfam Glutathione S-transferase, N-terminal domain 22 99 IPR004045 -
Pvu10g0876 231 SUPERFAMILY GST C-terminal domain-like 99 224 IPR036282 -
Pvu10g0876 231 Gene3D Glutaredoxin 2 105 - -
Pvu10g0876 231 SUPERFAMILY Thioredoxin-like 19 102 IPR036249 -
Pvu10g0876 231 TIGRFAM maiA: maleylacetoacetate isomerase 21 225 IPR005955 GO:0003824|GO:0005737|GO:0009072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0876 Pvu-Chr10 31425669 31431053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0876 16 223 Glutathione S-transferase Gene Family AT2G02380 49.761 2.27e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0876 K01800 - gmx:100796296 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0876 10 31425669 31431053 Pvu10g0876 10 31425669 31431053 ECH