Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0870 ATGTTGAAGGAATTGGTTACTGTGGTGTTGATTGTGATGGTAAAGATGGTGCAAAGTGAAGAAGAAATTGATGGGGTTTTAGACGGGAAGAAACATGTGCGTGTTACAAATGACTTGAACGATGGCATTCTGGTCCATCTCCATTGTCGATCGAAGGACGATGATCTTGGAGAACATGTTCTTGGCAATGGAGAGTTCCAAGAATGGACCTTCAAAGATAACATTGGTGACACCACTCTTTTTTGGTGTTCCATGGATGCATACAATGTCCAAATGAGTTTTGAAATTTACAGTGCAGTAGCTGATAATCCAAAATGTGATAAACAATGCTTTAGAAGTTTGAGGACAGATGGAGCATATTTCTATAATGAATTTGGGGACAGATGGGAGAAGAGACAGTCATGGAATATTCATAAACCCCCAACTAGTGCTAAACCATGA 441 0.3968 MLKELVTVVLIVMVKMVQSEEEIDGVLDGKKHVRVTNDLNDGILVHLHCRSKDDDLGEHVLGNGEFQEWTFKDNIGDTTLFWCSMDAYNVQMSFEIYSAVADNPKCDKQCFRSLRTDGAYFYNEFGDRWEKRQSWNIHKPPTSAKP* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0870 146 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
Pvu10g0870 146 PANTHER - 16 121 IPR010264 -
Pvu10g0870 146 PANTHER PUMILIO HOMOLOG 15-LIKE 16 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0870 Pvu-Chr10 31213760 31214200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0870 6 136 Carbohydrate Esterase AT3G16970 24.627 2.68e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0870 - - pvu:PHAVU_010G083600g 169.474