Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu10g0867 | ATGCATAGAGGTCACTCCAACTTTCATGCTCGTAGAGGCAACATGCATAATCATCCTGCTAGAGGTCACTCCAACTTTCATGCTCCTAGAGGCAACATGCATAATCTTCCTCCTAGGGCCTTTCGTCAAGAAGTTGCTTCATTCCGTGACCATCATAGTGATATACAATTGGACATTGACGACATGTCATATGAGGAGCTTCTTATATTAGGTGAACGGATTGGCAGCGTAGAGAGGGGTTTGTCCGAAGAAATTATTGCAAGCCAAATGCTAACAAAAACTTATCTACTGCCTAATAACTTGGAGGGATCAACTTCTGAGGAACTGGAAATCGATCTTTGCATAATATGTCAGGATGAATATAAGAACGAAGAGGAGATTGGAATTCTTCAATGCGGACATGAATACCATGCAGATTGTGTAAGGAGATGGTTACAAGAGAAAAATGTATGTCCCCTATGCAAATCAAAAGCATTGGCTATTGGATAG | 489 | 0.411 | MHRGHSNFHARRGNMHNHPARGHSNFHAPRGNMHNLPPRAFRQEVASFRDHHSDIQLDIDDMSYEELLILGERIGSVERGLSEEIIASQMLTKTYLLPNNLEGSTSEELEIDLCIICQDEYKNEEEIGILQCGHEYHADCVRRWLQEKNVCPLCKSKALAIG* | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu10g0867 | 162 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 93 | 160 | IPR013083 | - | |
Pvu10g0867 | 162 | SMART | ring_2 | 114 | 154 | IPR001841 | - | |
Pvu10g0867 | 162 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 155 | IPR001841 | - | |
Pvu10g0867 | 162 | PANTHER | OS04G0185500 PROTEIN | 41 | 159 | - | - | |
Pvu10g0867 | 162 | Pfam | Ring finger domain | 113 | 155 | IPR001841 | - | |
Pvu10g0867 | 162 | SUPERFAMILY | RING/U-box | 113 | 158 | - | - | |
Pvu10g0867 | 162 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 41 | 159 | IPR045191 | GO:0061630 | |
Pvu10g0867 | 162 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Pvu10g0867 | 162 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu10g0867 | Pvu-Chr10 | 31081417 | 31082186 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu10g0867 | 43 | 159 | C3H Transcription Factor Family | AT2G15530 | 46.154 | 8.38e-32 | 117 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu10g0867 | K19041 | - | pvu:PHAVU_010G0831000 | 296.975 |