Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0862 GTTAGTGCTAACATTATAGCAACTTCCAATTCCTCATCCACTAATGAGGAACTAGAAGCTTTGCTTCAGAGTAGATGGGGAGCTCAAAGTGTTATAGAGATTTCAACTAAACAGTATTTCTATATTCCTTCAAATGAAGCTCATATTCAGTATTTCAATGTGGCTGCATTCCCTGATTTAATCCGTCTAGATCTTAGTGGATCTGGACTCAAAGGAAATATTCCTTCAGAAATAAGTTCTCTTAAAAAGCTTGTTCATCTTGATCTGTCCTCTAATTGTCTTCAAGGTGTGATCCCTTCTACTTTGGGCCAATTGAAGAATTTGACCCTACTCTCCCTTGACTCAAACCAACTTAAAGGCCACATTCCTTCAGAACTAGGGAATTTAAGAGGTTTGGAGCAGTTAACTCTTTCAAATAACTCACTAAATGGCTCAATCCCTTCTACTTTAGAGCACTTGGACCATCTCAAAGTTTTGGATCTTTCTCATAATAAGATTTTTGGTGTTATACCAGAGGGGATATCTGCACTGACACAACTAACTAGTGTTCAACTATCTTGGAATCAAATAACTGGTTCCATTCCACCTGGGATTGGGAAAATCCTAAGACTTGGAAGTTTAGATATTTCCAACAACCATCTCGAGGGACCTATCCCAGATGATGTTTTGAACCATTGTTGGTGGTATCTGCAGTTAAGCCACAACTCTTTAAACGGGAGCATTCCTTCTCAAGTAGGAAATATTTCATATCTAGACCTTAGTTATAATGACCTCACAGGCAACATACCTGAGGGCCTTCATTCTGTTCCTCACCTTAATTTGTCATACAATTCCTTTAATGTTTCAGATCACATTTTCTGTGGTTTTCCAAAAGACTCTTTAATTGGTAATAAGGATATGAAATATTCGTGCTCTTTGGACGTTGATATTTCTAATGCTGATATTTCTCTAGTAATGATACTTGTCTTCTCTACCTTCAGTGGCATGGTTTTTTCAATGGTTATTGTCTGTTGGGGAATTCATGTTTTCTGTCCCCTCCATAATGAGTTTGGAAAAGACCAAAGAAGAAAGAATGGAGACATGCTTTCAATTTGGAACTATGATGGTAAGATTGCATTTGAAGACATAATTAAGGCCACAGAAGACTTTGATATAAAGTACTGCATAGGAACAGGTGCTTATGGAAGTGTGTACAAAGCACAACTCCCCAGTGGCAAAATTGTTGCACTGAAAAAGCTTCACAAAGCAGAATCAGAAAATCCATCCTCTTACAAGAGCTTTTGCAATGAGACCAAGATCTTGACAGAAATTCGGCATCGTAACATCATTAAGCTTTATGGCTTCTGTTTGCATAATAAGTGTATGTTCTTGGTGTATGAGTATATGGAAAGAGGAAGCTTATTTTGTAACTTGTCTTATGATGTGGAAGCTCAAGAGCTGAATTGGAGCAAGAGAATAAATGTTGTAAAAGAGATAGCCTATGGCTTGGCTCACATGCACCATGATTGTACCACATCCATTGTTCATCGAGACATAAGCAGCAACAACATTTTGTTAAACTCAGAGTTACAGGCTTTCATCTCAGACTTTGGTACAGCAAGACTTCTTGATTTTCATTCATCAAATCAGACTCTTCCTGCTGGTACTTATGGATATGTTGCTCCAGAATTGGCTTACACCTTGAGTGTGACCACCAAATGTGATGTGTATAGCTTTGGAGTAGTGGTTTTGGAAACAATGATGGGTAGACATCCTGCTGAATTGATTTCTTCTTTATCAGAACCAGCCATTCAGAACAAAAAGCTGAAAGATATATTGGACACACGTTGTTGGGTGATGAACTAG 1845 0.3805 VSANIIATSNSSSTNEELEALLQSRWGAQSVIEISTKQYFYIPSNEAHIQYFNVAAFPDLIRLDLSGSGLKGNIPSEISSLKKLVHLDLSSNCLQGVIPSTLGQLKNLTLLSLDSNQLKGHIPSELGNLRGLEQLTLSNNSLNGSIPSTLEHLDHLKVLDLSHNKIFGVIPEGISALTQLTSVQLSWNQITGSIPPGIGKILRLGSLDISNNHLEGPIPDDVLNHCWWYLQLSHNSLNGSIPSQVGNISYLDLSYNDLTGNIPEGLHSVPHLNLSYNSFNVSDHIFCGFPKDSLIGNKDMKYSCSLDVDISNADISLVMILVFSTFSGMVFSMVIVCWGIHVFCPLHNEFGKDQRRKNGDMLSIWNYDGKIAFEDIIKATEDFDIKYCIGTGAYGSVYKAQLPSGKIVALKKLHKAESENPSSYKSFCNETKILTEIRHRNIIKLYGFCLHNKCMFLVYEYMERGSLFCNLSYDVEAQELNWSKRINVVKEIAYGLAHMHHDCTTSIVHRDISSNNILLNSELQAFISDFGTARLLDFHSSNQTLPAGTYGYVAPELAYTLSVTTKCDVYSFGVVVLETMMGRHPAELISSLSEPAIQNKKLKDILDTRCWVMN* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0862 614 SMART LRR_typ_2 177 201 IPR003591 -
Pvu10g0862 614 SMART LRR_typ_2 81 104 IPR003591 -
Pvu10g0862 614 SMART LRR_typ_2 105 128 IPR003591 -
Pvu10g0862 614 SMART LRR_typ_2 129 152 IPR003591 -
Pvu10g0862 614 SMART LRR_typ_2 153 176 IPR003591 -
Pvu10g0862 614 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 57 609 - -
Pvu10g0862 614 ProSiteProfiles Protein kinase domain profile. 383 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0862 614 PRINTS Leucine-rich repeat signature 84 97 - -
Pvu10g0862 614 PRINTS Leucine-rich repeat signature 153 166 - -
Pvu10g0862 614 Pfam Leucine rich repeat 60 118 IPR001611 GO:0005515
Pvu10g0862 614 Pfam Leucine rich repeat 130 190 IPR001611 GO:0005515
Pvu10g0862 614 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Pvu10g0862 614 SUPERFAMILY L domain-like 50 290 - -
Pvu10g0862 614 Gene3D Phosphorylase Kinase; domain 1 348 461 - -
Pvu10g0862 614 Gene3D Transferase(Phosphotransferase) domain 1 462 613 - -
Pvu10g0862 614 Gene3D Ribonuclease Inhibitor 29 306 IPR032675 -
Pvu10g0862 614 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 57 609 - -
Pvu10g0862 614 Pfam Protein kinase domain 387 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0862 614 ProSitePatterns Tyrosine protein kinases specific active-site signature. 507 519 IPR008266 GO:0004672|GO:0006468
Pvu10g0862 614 SUPERFAMILY Protein kinase-like (PK-like) 363 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0862 Pvu-Chr10 30903951 30908042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0862 60 555 Receptor kinase-like Gene Family AT4G08850 40.417 1.01e-110 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu10g0862 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0862 - - pvu:PHAVU_010G082800g 1222.61