Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0857 ATGGCTAACTGTGTTTGCAATTTGATACTTATGGCCTTCTATATCATGGCTCAGCTACCATCTCTGATTGGTGCCACCATTCCTCCTTCTTCCACTTCCTCATCCATTCATCAGGAACGACAGGCTTTGCTCCACAGCGGTTGGTGGAATGATCACCCCAATAACTCTCATCATTGTGATTGGGAGGGTATCTCTTGCAATGAAGCTGGAAGTGTTACTGGTATTAACAGAACATCGTTAAAGAATCCTTCATCAAAAGAATTGCTTTGGATTCACAACTTGAACTTCACTGCCTTCTCCAATTTAGTCTATCTTGGTCTAACTGGAATGGGTCTTAGAGGAACCATCCCTACACAAATAAGCCTTCCTACAAACCTTACCTATCTTGTTCTGTCCCACAATCGTCTCCAAGGTTCAATACCACCACAACTCGGCAATTTGACACAATTGCTGGCGTTATCTCTATATAACAACTTGTTAACAGGTTCAATCCCTTCTACATTTGGTCAATTGAAGAATTTGGCCTATCTTTTTCTTGATTCAAACAAACTTCAAGGAAAATTTGACCCAATTCTTTCTTGCTTTGATCCAATTGCAGGTTCAATACCACCACCACTTGCTAATTTGACACAATTGCAGGCGTTATCTCTCTATAACAATTTGCTAACAGGTTCAATTCCTCCTACCTTAGGTCGTTTGGGGAATTTGGTACACCTCTACCTTGATTATAATCAAATAGAAGGCCATATACCCGAAGAATTAGGAAATCTGTCCAAATTAGAAGTTTTGCAACTGGCTCATAATAAGATTACGGGTTTCATACCTCCACAACTTTTGCAAATGGACAAATTGTTCTCTTTATATCTCTCATCAAATCAGTTATGTGGTTCAATCCCATTAGAAACCATGAAATGTCCCTATGCTAAAATGGTTGATTTAAGCCATAACTTGTTTAATGGAAGCATAACTTCTCAAATTGGTTGTGTCAATGAACTTAATCTTAGTCACAATTTTCTTGTTGGTGAGATTCCATTTCTTTTGAAAATGAACTCTATACTTGATCGATTGGATCTTAGTTATAATAATCTCTCGGGTAAAGTACATAAGGAACTTGTTAGTCTATCATATATAAATCTTTCGTACAATTCCTTTGACTTCTCACAAGACCTTGACTCAAAATCAGAGATACCAGACTATTGTTCTTTCCAAAAAGACTCTTTAATTAATCACCGGATGCTGAATTTCACGTTCTGCCACTTGGTCAACCAAACCAATATCCAAACTAGAAGAAGTAAGCCTCTCATCAAGTTAATTGTTCTTCCCATAATTTGCTTCACACTTTTAGTACTCCTTCCAACATTATGTTACGCAAGATGCATTCATAAGGCCAAGTGTGAAGGAACATCAACAAAGAATGGAAACTTGTTTTCTATATGGAACTATGATGGTAAAATTGCATTTGAAGACATCATTGAAGCAACACAAGACTTTGACATCAAGTATTGTATTGGAATAGGTTCATATGGTAGTGTGTATAGAGCACAACTGCCCAGTGGCAACATTGTTGCATTAAAAAAGCTCCATCGAATGGAATCTCAAAATCCATCATTTGACAAAAGTTTTCGAAATGAGGTGAAGATGTTAACAGAAATCCGTCATAAAAACATTGTAAAGCTTCATGGATTTTGCCTCCACAATCAATGCATGTTTTTGGTCTATCAATACATGGAAAGAGGTAGTTTATTTTATATTTTGAATAATGACGTGGAAGCTGAGGAGTTGAATTGGAGTAAGAGAGTGAATGTTATTAAAGGGGTAGCAGAGGCTTTATCTTACATGCATCATGATTGTGTCCCACCAATTGTTCATCGAGATGTAACAAGTAGCAATGTTTTGTTAAACTCACAATTAGAGGCCTATGTCTCAGACTTTGGCACAGCTAGGCTCCTCGATCCTGATTCTTCAAATCAAACCTTGGTAGTTGGCACTTATGGTTACATTGCTCCAGAGCTTGCTTATACATTGAGCGTGACAGAAAAGTGTGATGTTTATAGTTTTGGGGTGGTGACTTTGGAAACATTAATGGGAAAACATCCCGGAGAGCTAATCTCATCTTTATCAATCCCAACTACTCCAAATATGTTCGTGAAAGATCTCTTGGATTCACGTCTTCCTTTTCCTCTTCAGAAAGATGCTCAAGATATAAATCTTGTGGTGACAATAGCATTATCATGTTTATGTTCCAAACCAAACTTAAGGCCATCAATTCAACAAGTGGCTGAGAAACTCTCCATTTTGATCCATCAATTGATGAGTCAAGACATATGTCATTTTTCATCCAAGTGTCAAGGATTATATTAA 2361 0.3731 MANCVCNLILMAFYIMAQLPSLIGATIPPSSTSSSIHQERQALLHSGWWNDHPNNSHHCDWEGISCNEAGSVTGINRTSLKNPSSKELLWIHNLNFTAFSNLVYLGLTGMGLRGTIPTQISLPTNLTYLVLSHNRLQGSIPPQLGNLTQLLALSLYNNLLTGSIPSTFGQLKNLAYLFLDSNKLQGKFDPILSCFDPIAGSIPPPLANLTQLQALSLYNNLLTGSIPPTLGRLGNLVHLYLDYNQIEGHIPEELGNLSKLEVLQLAHNKITGFIPPQLLQMDKLFSLYLSSNQLCGSIPLETMKCPYAKMVDLSHNLFNGSITSQIGCVNELNLSHNFLVGEIPFLLKMNSILDRLDLSYNNLSGKVHKELVSLSYINLSYNSFDFSQDLDSKSEIPDYCSFQKDSLINHRMLNFTFCHLVNQTNIQTRRSKPLIKLIVLPIICFTLLVLLPTLCYARCIHKAKCEGTSTKNGNLFSIWNYDGKIAFEDIIEATQDFDIKYCIGIGSYGSVYRAQLPSGNIVALKKLHRMESQNPSFDKSFRNEVKMLTEIRHKNIVKLHGFCLHNQCMFLVYQYMERGSLFYILNNDVEAEELNWSKRVNVIKGVAEALSYMHHDCVPPIVHRDVTSSNVLLNSQLEAYVSDFGTARLLDPDSSNQTLVVGTYGYIAPELAYTLSVTEKCDVYSFGVVTLETLMGKHPGELISSLSIPTTPNMFVKDLLDSRLPFPLQKDAQDINLVVTIALSCLCSKPNLRPSIQQVAEKLSILIHQLMSQDICHFSSKCQGLY* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0857 786 Gene3D Ribonuclease Inhibitor 31 195 IPR032675 -
Pvu10g0857 786 SUPERFAMILY Protein kinase-like (PK-like) 479 763 IPR011009 -
Pvu10g0857 786 SUPERFAMILY L domain-like 303 385 - -
Pvu10g0857 786 Pfam Leucine rich repeat 255 294 IPR001611 GO:0005515
Pvu10g0857 786 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Pvu10g0857 786 Gene3D Transferase(Phosphotransferase) domain 1 576 779 - -
Pvu10g0857 786 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Pvu10g0857 786 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 198 763 - -
Pvu10g0857 786 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 189 - -
Pvu10g0857 786 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 112 325 - -
Pvu10g0857 786 Gene3D Ribonuclease Inhibitor 196 423 IPR032675 -
Pvu10g0857 786 PANTHER OS10G0467900 PROTEIN 9 189 - -
Pvu10g0857 786 PANTHER OS10G0467900 PROTEIN 198 763 - -
Pvu10g0857 786 PANTHER OS10G0467900 PROTEIN 112 325 - -
Pvu10g0857 786 ProSitePatterns Tyrosine protein kinases specific active-site signature. 621 633 IPR008266 GO:0004672|GO:0006468
Pvu10g0857 786 SUPERFAMILY L domain-like 56 322 - -
Pvu10g0857 786 ProSiteProfiles Protein kinase domain profile. 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0857 786 Pfam Protein kinase domain 501 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0857 786 SMART LRR_typ_2 233 256 IPR003591 -
Pvu10g0857 786 SMART LRR_typ_2 209 232 IPR003591 -
Pvu10g0857 786 SMART LRR_typ_2 257 281 IPR003591 -
Pvu10g0857 786 SMART LRR_typ_2 147 170 IPR003591 -
Pvu10g0857 786 Gene3D Phosphorylase Kinase; domain 1 460 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0857 Pvu-Chr10 30582013 30585042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0857 100 669 Receptor kinase-like Gene Family AT4G08850 36.816 1.00e-116 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu10g0857 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0857 - - vun:114166569 1129.39