Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0838 ATGGCACAACTCAACCTCACATTGTTTGTTGTTTTCCTCTCTCTCTTATTCTCATTTCTTGCTGCCCCAGTTGAGCCATCATCATTGACAAGGCACAGAAATCCTAAAACAATGGCCTACATAGAGTCCTCTTGCAATGGCACCCTCTATCCCAATCTCTGCATCCGTTGTCTAGCACAATATGCCAAATCCTCCTTAAATGGCCCACAACACTTGGCTCAACATGCCCTCTCAGTGAGCCTCTCTAGGGCAGTCCAAACAAAAGGGTACCTTTTGAAAGTGGCAAAGGAACTTCAAGCCATCAAGAGCAACAAAAGAGAGTACCTAACAGTGCAAGATTGTGTGAACCAAATCACTGATAGTGTGGAACAAATAAGCCAAGCCATGAAAGAACTACGTAGGTTCAACCAGCATGGATCAAGCATGAATGATAAGATGTTGTGGCACATAAGCAATGTTGAAACATGGGTGAGCACTGCTTTGACAGATGCTAGTAGTTGTGTGTACTCATTTCCTGGGCATAGGATGAGTAAGAGAATGGCTTCTATTAAGGTTAAGGCCATGAATGTTGCACAAGTTACAAGTAATGCTCTTTTCTTGTTTCATAGATATGCATCTACCTACCAGAAAGCCACAATGACCACCAATAATTCCTAA 657 0.4262 MAQLNLTLFVVFLSLLFSFLAAPVEPSSLTRHRNPKTMAYIESSCNGTLYPNLCIRCLAQYAKSSLNGPQHLAQHALSVSLSRAVQTKGYLLKVAKELQAIKSNKREYLTVQDCVNQITDSVEQISQAMKELRRFNQHGSSMNDKMLWHISNVETWVSTALTDASSCVYSFPGHRMSKRMASIKVKAMNVAQVTSNALFLFHRYASTYQKATMTTNNS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0838 218 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 203 IPR006501 GO:0004857
Pvu10g0838 218 PANTHER BNAANNG18590D PROTEIN 2 208 - -
Pvu10g0838 218 SMART PMEI_2 36 200 IPR006501 GO:0004857
Pvu10g0838 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 204 IPR035513 -
Pvu10g0838 218 CDD PMEI-like_3 43 206 - -
Pvu10g0838 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 208 - -
Pvu10g0838 218 Pfam Plant invertase/pectin methylesterase inhibitor 40 198 IPR006501 GO:0004857
Pvu10g0838 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0838 Pvu-Chr10 29978875 29979531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0838 20 217 Carbohydrate Esterase AT3G14310 21.569 3.78e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0838 - - gmx:100791798 349.747