Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0834 ATGGCCACTTATGCCACCACCACCACCACCACCTTGTTCCTCCTCCTTGGCATGGCCACCACCACCCTTTGCCTCCAAGAAAAGGGTGTCCTCCAAATGGCCCAAAATCATGTTTCTCTAGCCAAGAACTGGGTGGCAAACGCTTTGAGATTGCATGGCTTTGAAAGCCTAAGCCTTTCTGACAAAACAAGTGTTGTAGCCCTTAGAGACTGTGCGAAGCTGTACGAGGAGAGCGAGTGTAGGCTCTCTCACATGATGTCCCAAAACAGCAGTTACACCAAAGAAGATGCACTCACATGGATAAGTGCTTTGATGACAAATCACAGGACCTGTTTGGATGGTCTGCAAGAAAAAGGGTATGTTCAAGCTCAGATTCTGGATACAAACTTGACCATGTCGCTTAAGCAAGCTCTTATTTTGTATTCAAAGAATAAAGGCATAGCCAAAGGACCACCACCACAGGGAACAATATCCAAAGCTTCTGGCATTTTAGAATCATGGAGTGAAGCAAGCTATGAGCCAGACTTCACAGTGGCACAGGATGGTTCAGGAACCCACAGAACAATCCAAGCAGCAGTGAATGCAATTGGACATGATCGTCCTGCAAGAGTAATCATACATGTAAAATCAGGGATCTATACTGAGAAGGTGCAAATTGGACAGAAACTGCATAATGTAATGCTTGTAGGAGATGGCATAGACAAAACTATTGTTACTGCCAACAGAAATGTTGCTCAAGGTTCTACCACTATGAACTCAGCCACGTTTGATGTATCAGGTGATGGATTTTGGGCAAGAGACATGACATTTGAGAACAGTGCAGGCCCAGAAAAGCACCAAGCAGTGGCACTAAAGGTTAGTTCAGACTTATCAGTGTTCTATAGGTGCAGCTTCAAAGGCTATCAAGACACTCTTTACGTTCATTCAAATCGCCAATTCTACCGTGACTGTCACATATATGGCACCATAGATTTCATATTCGGGGATGCTGCAGTGGTGCTACAGAACTGTGACATCTTAGTGAGGAAGCCAATGAGCCAGCAAGCCAACTTCATCACAGCACAAGGAAGAGATGACCCTAACGAGAACACTGGGATTGCAATCCAGAGTTGCAGGGTTAGAGCAGCATCAGAGTTTGTGGCCCTGAAGGACTCCTACAAGACATTCCTTGGAAGGCCCTGGAAGAGGTACTCAAGGACTCTGTTCCTCAAGAGTGAGTTGGATGGACTAATTGATCCAAAAGGGTGGGGTGAATGGAGTGGAAACTTTGCAGTCTCAACTTTGTTCTATGGAGAGTATATGAACACAGGAAGTGGTGCCTCTACAGAAAATAGGGTGACTTGGCCTGGTTTTCATGTGCTGAGAAGTGCTAGTGAGGCCTCACCCTTCACAGTGAACCAGTTTCTGCAAGGAGAAAGGTGGATTCCTGCTACAGGGGTGCCATTCTCTTCTGGAATATGA 1461 0.4586 MATYATTTTTTLFLLLGMATTTLCLQEKGVLQMAQNHVSLAKNWVANALRLHGFESLSLSDKTSVVALRDCAKLYEESECRLSHMMSQNSSYTKEDALTWISALMTNHRTCLDGLQEKGYVQAQILDTNLTMSLKQALILYSKNKGIAKGPPPQGTISKASGILESWSEASYEPDFTVAQDGSGTHRTIQAAVNAIGHDRPARVIIHVKSGIYTEKVQIGQKLHNVMLVGDGIDKTIVTANRNVAQGSTTMNSATFDVSGDGFWARDMTFENSAGPEKHQAVALKVSSDLSVFYRCSFKGYQDTLYVHSNRQFYRDCHIYGTIDFIFGDAAVVLQNCDILVRKPMSQQANFITAQGRDDPNENTGIAIQSCRVRAASEFVALKDSYKTFLGRPWKRYSRTLFLKSELDGLIDPKGWGEWSGNFAVSTLFYGEYMNTGSGASTENRVTWPGFHVLRSASEASPFTVNQFLQGERWIPATGVPFSSGI* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0834 486 Pfam Plant invertase/pectin methylesterase inhibitor 33 123 IPR006501 GO:0004857
Pvu10g0834 486 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 132 IPR035513 -
Pvu10g0834 486 CDD PMEI-like_4 30 144 - -
Pvu10g0834 486 SMART PMEI_2 26 140 IPR006501 GO:0004857
Pvu10g0834 486 Gene3D - 169 486 IPR012334 -
Pvu10g0834 486 SUPERFAMILY Pectin lyase-like 173 485 IPR011050 -
Pvu10g0834 486 Pfam Pectinesterase 175 472 IPR000070 GO:0030599|GO:0042545
Pvu10g0834 486 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 142 IPR035513 -
Pvu10g0834 486 ProSitePatterns Pectinesterase signature 2. 319 328 IPR033131 -
Pvu10g0834 486 PANTHER PECTINESTERASE 7 485 - -
Pvu10g0834 486 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 7 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0834 Pvu-Chr10 29923032 29926983 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0834 1 486 Carbohydrate Esterase AT3G60730 53.788 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0834 K01051 - gmx:100792852 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0834 10 29923032 29926983 Pvu10g0834 10 29923032 29926983 ECH