Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0831 ATGGCATGTTTTTGCTTGCTCCTACCACTGTTCATTGCTTTCCAACTATTATCTTTCATTTCATGTTATTCGTTAAACTTTGGTGCCACCAAACTCCAAACCCTCAACCATTGCGGAAACCCTCGTGAAACAACTGCTTGGGCTAATTGTGTTGAGCTTTATGAGCAAACCATTCGTAAACTCAATGAAACCTTAGACCCTAACATCGACTACTCCCAAGTTGATGCTCAAGCCTGGCTCAGCACAACTCTCACTAACCTTGAGGCATGCAAAGCTGGGTTCTACGACCTTGGGGTTCAAGACTATGTTCTTCCTTTCATGTCCAACAATGTTACCAAGTTATTGAGCAGCACTTTGGCTCTAAACAAAGTTCAATATGAAGAACCAATTTACAAAGATGGATTTCCAACATGGGTCAAGCCAAGTGATAGGAAGTTGGTGGCCAAAGATGGGTCTGCAAAGTACACAATAGTGAGTGCAGCCATAAATGCTGCACCAAAGAGTAGCAGCGGAATGTATGTGATATATGTGAAGAGTGGAGTATATAATGAACAAGTTGAGATAAAAGCAAAGAATATAATGTTGGTGGGAGATGGTATTGGAAAGACCATAATCATAGGTAGCAAAAGTGTTGGAGGGGGCATCACAACCTTTCGTTCAGCTACTGTTGTTGTTCTTGGAGATGGATTTGTAGCTCAAGCCATCACGTTTAGAAATACTGCTGGTGCAGAAAATCACCAAGTTGTTGCACTGTGTTCTGGATCAGACTTATCAGTGTTTTACAAATGTAGTTTTGAAGGTTACCAAGACACACTATACGTCCACTATGATAGAAATTTCTATAGAGAATGTGACATATATGGCACAATTGACTTCATCTTTGGCAATGTTGTTGTGACTTATCTTGGAAGACCATGGAAGCAATATTCTAGAACAGTTTTCATGAAGACTTATCTTGATGGCTTGATTAATCCAGCGGGTTGGTTAGAATGGAGTGAGTACATGAACACTGATCCAGGTTCTTCTACCGCTAGAAGAGTTAAATGGAAAGTCTTTCGTGTGATGACTATGGCTTCCGAGGCTTCAAAGTTTATCGTTGCTAATTTTATTACTGGAAACACATGGTTACCTTCCACCATAGTTCCTTTTATCTCTCCTCTTTAA 1164 0.4029 MACFCLLLPLFIAFQLLSFISCYSLNFGATKLQTLNHCGNPRETTAWANCVELYEQTIRKLNETLDPNIDYSQVDAQAWLSTTLTNLEACKAGFYDLGVQDYVLPFMSNNVTKLLSSTLALNKVQYEEPIYKDGFPTWVKPSDRKLVAKDGSAKYTIVSAAINAAPKSSSGMYVIYVKSGVYNEQVEIKAKNIMLVGDGIGKTIIIGSKSVGGGITTFRSATVVVLGDGFVAQAITFRNTAGAENHQVVALCSGSDLSVFYKCSFEGYQDTLYVHYDRNFYRECDIYGTIDFIFGNVVVTYLGRPWKQYSRTVFMKTYLDGLINPAGWLEWSEYMNTDPGSSTARRVKWKVFRVMTMASEASKFIVANFITGNTWLPSTIVPFISPL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0831 387 PANTHER PECTINESTERASE 299 385 - -
Pvu10g0831 387 PANTHER PECTINESTERASE 39 299 - -
Pvu10g0831 387 PANTHER PECTINESTERASE 299 385 - -
Pvu10g0831 387 PANTHER PECTINESTERASE 39 299 - -
Pvu10g0831 387 ProSitePatterns Pectinesterase signature 2. 286 295 IPR033131 -
Pvu10g0831 387 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 124 IPR035513 -
Pvu10g0831 387 ProSitePatterns Pectinesterase signature 1. 169 188 IPR018040 -
Pvu10g0831 387 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 124 IPR035513 -
Pvu10g0831 387 Pfam Plant invertase/pectin methylesterase inhibitor 41 121 IPR006501 GO:0004857
Pvu10g0831 387 SMART PMEI_2 15 121 IPR006501 GO:0004857
Pvu10g0831 387 SUPERFAMILY Pectin lyase-like 145 384 IPR011050 -
Pvu10g0831 387 Pfam Pectinesterase 146 298 IPR000070 GO:0030599|GO:0042545
Pvu10g0831 387 Pfam Pectinesterase 299 373 IPR000070 GO:0030599|GO:0042545
Pvu10g0831 387 Gene3D - 140 298 IPR012334 -
Pvu10g0831 387 Gene3D - 299 387 IPR012334 -
Pvu10g0831 387 TIGRFAM PME_inhib: pectinesterase inhibitor domain 34 123 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0831 Pvu-Chr10 29838810 29843918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0831 37 387 Carbohydrate Esterase AT2G45220 53.505 2.23e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0831 K01051 - gmx:100819641 531.561