Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0828 ATGCAGTTCAGGCTAGGCAAGCGCGTAATCTGTGTCGCCAAATGGGTCTTCCGGCGGGTCAGAATCCGACCCAACAGATATTACCGCCTCGGATCCACCTCTCCTTCGCACAATCGTACTTATAATCCCATCACGAAGCTTCTCACGTGGGGGACAAAGTTGAAGAGAGGAGCCAAGTCTCTCTGCAAGAAATCCGGGTCGGGTCCCGTTTGCGAGAGTGCTCCGGCGGTGCCCAAAGGGCACTTGGCGGTTTACGTGGCGGAGGATGACGGCGAGTGTCGCCGGGTTTTGGTACCGGTGATTTACTTCAACCACCCTCTCTTCAGCGGGTTGTTAATGGAGGCGGAGAAGGAATTCGGGTTCCAGCACCCCGGTGGGATCACGATTCCGTGCCGACTCACCGAGTTTGAACGGGTCAAAACCCGGATCGCGTCCGGGTCGGGTTCACGCGGGAGAACCCGGAGATTGGGGCGGCGGCAATATTCTTGA 489 0.5767 MQFRLGKRVICVAKWVFRRVRIRPNRYYRLGSTSPSHNRTYNPITKLLTWGTKLKRGAKSLCKKSGSGPVCESAPAVPKGHLAVYVAEDDGECRRVLVPVIYFNHPLFSGLLMEAEKEFGFQHPGGITIPCRLTEFERVKTRIASGSGSRGRTRRLGRRQYS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0828 162 Pfam Auxin responsive protein 65 140 IPR003676 GO:0009733
Pvu10g0828 162 PANTHER SMALL AUXIN-UP RNA-RELATED 3 153 - -
Pvu10g0828 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 153 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0828 Pvu-Chr10 29678795 29679931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0828 72 136 Calmodulin-binding Proteins AT3G43120 49.231 8.60e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0828 K14488 - gmx:100808164 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0828 10 29678795 29679931 Pvu10g0828 10 29678795 29679931 ECH