Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0815 ATGGGAGAAAGCCGAGTCTCCCACTGTTCCAAGACAAGCCCTTCTAACATTGATGAAGAGGAGTGTGAAAGACATGCCAATGAAGATCAAAGCAAGCAAAACAACAATGGAGGAAGCTCAAGTAACAGCACAGCGGAAGAGAGTGAGAAAAAAATTAGACCTTATATTAGATCCAAGTTACCAAGGCTTCGGTGGACACCTGATCTTCATCTTCGCTTTATTCATGCCGTTCAACGACTTGGAGGACAAGAGAGAGCAACACCTAAATTGGTTCTTCAATTGATGAATATGAAAGGTTTAAGTATTGCCCATGTCAAGAGTCATTTGCAGATGTTTAGGAGCAAAAAGGTGGATGACCGAAATCAAGTATTTTCCAATCATACCAGTCTTGTTGAAATTGGAGATAAAAATATTTACAATCTTAGTCAACTTTCCATGCTTCAAGCGTATAATCCCAGTCAAAGTTCGTCCTACAGCTACACAAACAATAACTATCCAAGTTATGGATTCGGGGATGCTTCTTTTGGTGTCTACGAAAAACTTGTACATATACCTTTCGATTGGTCAAATGGAATTTCTCAGGCAGGTTCATCCATTTCTGGTGAACAATCAACAAGCAAAACCCGTGAACCAAAATATGAGTTTTTCTCATTCGGTGCTTGTGAATCTCTATTCACAAGATTTAGCAACGTTGATCGCACTCCATCAAACAATATTATTCAACAAAGAGCACAAAACCTCATGCCTATGAATCCAACAACAGAAATGAAGACACTAAAAAGGAAGGCTCAAGATACATCACTTGATTTGAATCTGTCACTGAAACTAAACACAAAGATGGATGCTGAAGGGACAAAATTGGAGGACCATGAAGCTCATAGCAACCTATCTCTCTCATTGTGCTCTCAATCCTCCTCTTCCAATCTTAGCAGAGGTTGA 939 0.3951 MGESRVSHCSKTSPSNIDEEECERHANEDQSKQNNNGGSSSNSTAEESEKKIRPYIRSKLPRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNMKGLSIAHVKSHLQMFRSKKVDDRNQVFSNHTSLVEIGDKNIYNLSQLSMLQAYNPSQSSSYSYTNNNYPSYGFGDASFGVYEKLVHIPFDWSNGISQAGSSISGEQSTSKTREPKYEFFSFGACESLFTRFSNVDRTPSNNIIQQRAQNLMPMNPTTEMKTLKRKAQDTSLDLNLSLKLNTKMDAEGTKLEDHEAHSNLSLSLCSQSSSSNLSRG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0815 312 Gene3D - 60 117 - -
Pvu10g0815 312 MobiDBLite consensus disorder prediction 14 30 - -
Pvu10g0815 312 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Pvu10g0815 312 MobiDBLite consensus disorder prediction 31 45 - -
Pvu10g0815 312 PANTHER - 7 311 - -
Pvu10g0815 312 MobiDBLite consensus disorder prediction 1 53 - -
Pvu10g0815 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 117 IPR017930 -
Pvu10g0815 312 Pfam Myb-like DNA-binding domain 63 111 IPR001005 -
Pvu10g0815 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 311 IPR044848 GO:0003700
Pvu10g0815 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 61 116 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0815 Pvu-Chr10 27091864 27093588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0815 27 118 G2-like Transcription Factor Family AT2G42660 61.957 5.82e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu10g0815 Myb_DNA-binding 5.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0815 - - gmx:100801120 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0966 8 9786222 9788415 Pvu10g0815 10 27091864 27093588 PCT